RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LOXL3P58215 753 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 TFF3Q07654 80 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 TCF15Q12870 199 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 C1orf185Q5T7R7 199 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 DUX4L9Q6RFH8 374 aaPredicted RBP9.93□□□□□ -0.82
TP53-227ENST00000622645 SLC35E3Q7Z769 313 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 FAM90A1Q86YD7 464 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 TMEM147Q9BVK8 224 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 SLC25A22Q9H936 323 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 LAMP3Q9UQV4 416 aa9.93□□□□□ -0.82
TP53-227ENST00000622645 PLCE1Q9P212 2302 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 IGHV2-5P01817 119 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 DEFA4P12838 97 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 MAS1LP35410 378 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 EIF2S3P41091 472 aaKnown RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 RPS10P46783 165 aaKnown RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 ERVFRD-1P60508 538 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 S100A12P80511 92 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 PPP1R35Q8TAP8 253 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 METTL1Q9UBP6 276 aaKnown RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 JPT1Q9UK76 154 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 ATMQ13315 3056 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 SLC31A2O15432 143 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 LHBP01229 141 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 IFNA17P01571 189 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 S100A8P05109 93 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 S100A9P06702 114 aaKnown RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 CXCL1P09341 107 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 SMIM6P0DI80 62 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 BMP5P22003 454 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 ELOBQ15370 118 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 C1orf229Q6ZS94 237 aaPredicted RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 CENPVQ7Z7K6 275 aaPredicted RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 Q8TCH9 128 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 Q8WTZ3 238 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 MALSU1Q96EH3 234 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 MRPL37Q9BZE1 423 aaKnown RBP9.92□□□□□ -0.82
TP53-227ENST00000622645 TIMM9Q9Y5J7 89 aa9.92□□□□□ -0.82
TP53-227ENST00000622645 A0A087WWC5 75 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 YPEL1O60688 119 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 ATP6V1FQ16864 119 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 DEFB108BQ8NET1 73 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 CIB3Q96Q77 187 aaPredicted RBP9.91□□□□□ -0.82
TP53-227ENST00000622645 YPEL2Q96QA6 119 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 NPCDR1Q9BY65 106 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 IFI27L2Q9H2X8 130 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 SEBOXQ9HB31 216 aaPredicted RBP9.91□□□□□ -0.82
TP53-227ENST00000622645 VAX2Q9UIW0 290 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 IGLV3-9A0A075B6K5 115 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 TIMP3P35625 211 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 RTP5Q14D33 572 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 CR1LQ2VPA4 569 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 OR10G9Q8NGN4 311 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 OR10G7Q8NGN6 311 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 CALYQ9NYX4 217 aa9.91□□□□□ -0.82
TP53-227ENST00000622645 TGIF2-C20orf24A0A0A6YYL0 155 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 C15orf62A8K5M9 175 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 HPRT1P00492 218 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 FFAR4Q5NUL3 377 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 PRAMEF5Q5TYX0 476 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 TGIF2LYQ8IUE0 185 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 NIT2Q9NQR4 276 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 DSCAMO60469 2012 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 TRAV3A0A0B4J244 114 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 AP4M1O00189 453 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 F2RL2O00254 374 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 CLN5O75503 358 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 CYB5R3P00387 301 aaPredicted RBP9.9□□□□□ -0.82
TP53-227ENST00000622645 CD81P60033 236 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 GATAD1Q8WUU5 269 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 GCM1Q9NP62 436 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 OR6C3Q9NZP0 311 aa9.9□□□□□ -0.82
TP53-227ENST00000622645 A8MXE2 369 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 GNB2P62879 340 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 C17orf58Q2M2W7 97 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 P2RX4Q99571 388 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 IGHV1-46P01743 117 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CRYABP02511 175 aaKnown RBP9.89□□□□□ -0.83
TP53-227ENST00000622645 FABP1P07148 127 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CGB3P0DN86 165 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 CGB7P0DN87 165 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 TNFAIP6P98066 277 aaPredicted RBP9.89□□□□□ -0.83
TP53-227ENST00000622645 MEF2BQ02080 365 aaPredicted RBP9.89□□□□□ -0.83
TP53-227ENST00000622645 VWC2Q2TAL6 325 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 RAB24Q969Q5 203 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 S1PR3Q99500 378 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 ZNF251Q9BRH9 671 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 DCAF16Q9NXF7 216 aa9.89□□□□□ -0.83
TP53-227ENST00000622645 ROS1P08922 2347 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms