RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PLCH2O75038 1416 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 TNS3Q68CZ2 1445 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 SMIM26A0A096LP01 95 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 IGKV1-8A0A0C4DH67 115 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 C5orf63A6NC05 138 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 A6NDX4 124 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 CD300LBA8K4G0 201 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 INMT-MINDY4F8WBC2 141 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 RGS5O15539 181 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 TCF21O43680 179 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 SS18L1O75177 396 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 KCNK2O95069 426 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 FAM107AO95990 144 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 IGF2P01344 180 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF806P0C7X5 589 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF25P17030 456 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 CNTFRP26992 372 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 BLVRBP30043 206 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 HSPA9P38646 679 aaKnown RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 RBP2P50120 134 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 UBE2NP61088 152 aaKnown RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 BAMBIQ13145 260 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ERCC8Q13216 396 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 JOSD1Q15040 202 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 C12orf74Q32Q52 190 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 COA6Q5JTJ3 125 aaKnown RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 DNLZQ5SXM8 178 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 SBSNQ6UWP8 590 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF493Q6ZR52 646 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00173Q6ZV60 143 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF283Q8N7M2 679 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 Q8N9W7 124 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 SLC30A7Q8NEW0 376 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 OR1L1Q8NH94 360 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 OR5P3Q8WZ94 311 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 FRZBQ92765 325 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 PTX4Q96A99 478 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM159Q96B96 161 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 SLC25A44Q96H78 314 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 GPR82Q96P67 336 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 TSPAN32Q96QS1 320 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 PARP12Q9H0J9 701 aaKnown RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 OR52D1Q9H346 318 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 GPR84Q9NQS5 396 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 PARP11Q9NR21 331 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 RBM12B-AS1Q9P1G2 102 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 RBM7Q9Y580 266 aaKnown RBP2.45□□□□□ -2.02
BRCA1-229ENST00000621897 ROBO3Q96MS0 1386 aa2.45□□□□□ -2.02
BRCA1-229ENST00000621897 IGKV1-27A0A075B6S5 117 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 TRAV8-1A0A0A6YYK1 113 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 FAM92AA1XBS5 289 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 NKX2-6A6NCS4 301 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 OR4C45A6NMZ5 311 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 KNCNA6PVL3 124 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 F5H5P2 479 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 ISLRO14498 428 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 GYG2O15488 501 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF207O43670 478 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 SLC37A4O43826 429 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 ANGPTL7O43827 346 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 POP7O75817 140 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF682O95780 498 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 HLA-DRB1P01911 266 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 CSN2P05814 226 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 C8GP07360 202 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 OR4Q2P0C623 313 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 OR12D1P0DN82 309 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 CPMP14384 443 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 RPS3P23396 243 aaKnown RBP eCLIP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 SRIP30626 198 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 OR10J1P30954 320 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 G6PCP35575 357 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 POLR2IP36954 125 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 LHX2P50458 406 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 POLR2HP52434 150 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF140P52738 457 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 EMP1P54849 157 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 HERVK_113P61574 105 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 PSG9Q00887 426 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 LTC4SQ16873 150 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 CASC10Q5T4H9 136 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 RFLNAQ6ZTI6 216 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 TCF23Q7RTU1 214 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 DAZ4Q86SG3 579 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 NUP35Q8NFH5 326 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 OR4C6Q8NH72 309 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 DCAKDQ8WVC6 231 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 MBD3L1Q8WWY6 194 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 RPUSD4Q96CM3 377 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 NARS2Q96I59 477 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM147Q9BVK8 224 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 MRPL20Q9BYC9 149 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 SAMD10Q9BYL1 202 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 IFI27L2Q9H2X8 130 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 DAZ1Q9NQZ3 744 aaKnown RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00527Q9UJ94 153 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms