RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 C22orf46C9J442 243 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 J3QW42 95 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 TOR1AO14656 332 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 SLC25A17O43808 307 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 ATP5J2P56134 94 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 HMGN3Q15651 99 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 STPG2Q8N412 459 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 OR4A16Q8NH70 328 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 C14orf79Q96F83 325 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A10PA6NDY2 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A18PA6NE21 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A16PA6NEW6 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A20PA6NIJ5 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A8PA6NJQ4 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A7PA6NKC0 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A22PA8MWA6 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A12PA8MX19 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A5PA8MXJ8 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A23PA8MXZ1 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A15PP0C7V4 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A13PP0C7W8 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A14PP0C7W9 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAM90A24PP0C7X0 464 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 GPR6P46095 362 aaPredicted RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 KCNJ3P48549 501 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 LOXL3P58215 753 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAHD2BQ6P2I3 314 aaPredicted RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 BAP18Q8IXM2 172 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 ZNF645Q8N7E2 425 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 NUP37Q8NFH4 326 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 SUN5Q8TC36 379 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 FAHD2AQ96GK7 314 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 MYOZ1Q9NP98 299 aaPredicted RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 TUBD1Q9UJT1 453 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 CDK2AP1O14519 115 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 DEDDO75618 318 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 FBP1P09467 338 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 EWSR1Q01844 656 aaKnown RBP eCLIP8.63□□□□□ -1.03
VPS11-208ENST00000621676 CATR1Q13166 79 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 SWI5Q1ZZU3 235 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 ZNF561Q8N587 486 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 TMEM252Q8N6L7 170 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 UBAC2Q8NBM4 344 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 SSMEM1Q8WWF3 244 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 RYDENQ9NUL5 291 aaKnown RBP8.63□□□□□ -1.03
VPS11-208ENST00000621676 H7C1Q1 480 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 NMBP08949 121 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 ZNF383Q8NA42 475 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 C18orf12Q96KH6 178 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 IFI27L2Q9H2X8 130 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 SLC35D1Q9NTN3 355 aa8.63□□□□□ -1.03
VPS11-208ENST00000621676 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
VPS11-208ENST00000621676 NCBP2LA6PVI3 153 aaKnown RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 PVALBP20472 110 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 LMO1P25800 156 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 LOXP28300 417 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 HOXA1P49639 335 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 TFF3Q07654 80 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 SURF2Q15527 256 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 GCSAMLQ5JQS6 135 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 OR5D13Q8NGL4 314 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 Q8TCH9 128 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 NMES1Q9C002 83 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 VSIRQ9H7M9 311 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 CHODLQ9H9P2 273 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 AUP1Q9Y679 476 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 BCL2L11O43521 198 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 SYNGR2O43760 224 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 TPPPO94811 219 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 UCP1P25874 307 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 HAGHQ16775 308 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 OR2G3Q8NGZ4 309 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 HARBI1Q96MB7 349 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 LIN7CQ9NUP9 197 aaKnown RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 E7EUB6 86 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 IFNL4K9M1U5 179 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 ACTL6BO94805 426 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 MUC1P15941 1255 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 ZFP36P26651 326 aaKnown RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 Q6ZRG5 221 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 ZNF843Q8N446 348 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
VPS11-208ENST00000621676 RBKSQ9H477 322 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
VPS11-208ENST00000621676 LEUTXA8MZ59 168 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 CA11O75493 328 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 CAMLGP49069 296 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 UBE2KP61086 200 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 ERVK-16P61578 105 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 GPR157Q5UAW9 335 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 SFT2D1Q8WV19 159 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 EDARADDQ8WWZ3 215 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms