RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 IGKV1D-39P04432 117 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 PPIAL4FP0DN26 164 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 LYNX1P0DP58 116 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
VTA1-205ENST00000620996 RPL39P5Q59GN2 51 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 EIF4E3Q8N5X7 224 aaKnown RBP8.25□□□□□ -1.09
VTA1-205ENST00000620996 OR2C3Q8N628 320 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 DMBX1Q8NFW5 382 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 PPIAL4AQ9Y536 164 aa8.25□□□□□ -1.09
VTA1-205ENST00000620996 ANKHD1Q8IWZ3 2542 aaKnown RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 BORCS7-ASMTA0A0B4J1R7 106 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 TRAV38-1A0A0B4J264 116 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 C17orf98A8MV24 154 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 S1PR2O95136 353 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 APOBEC3AP31941 199 aaPredicted RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 P2RY1P47900 373 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 ERVFRD-1P60508 538 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 NUTF2P61970 127 aaKnown RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
VTA1-205ENST00000620996 TNFRSF9Q07011 255 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 TMEM267Q0VDI3 215 aaPredicted RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 SLC25A24Q6NUK1 477 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 HIST1H2BAQ96A08 127 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 C5orf30Q96GV9 206 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 PARD6GQ9BYG4 376 aaPredicted RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 TMEM106BQ9NUM4 274 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 METTL1Q9UBP6 276 aaKnown RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 SLC25A10Q9UBX3 287 aaPredicted RBP8.24□□□□□ -1.09
VTA1-205ENST00000620996 DYSFO75923 2080 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 DUXBA0A1W2PPF3 345 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 AP4M1O00189 453 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 TAAR5O14804 337 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 FCGR3BO75015 233 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 IGKV1-5P01602 117 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 ARG1P05089 322 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 ZNF585BQ52M93 769 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 PRAMEF5Q5TYX0 476 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 Q6ZRM9 215 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 MUC15Q8N387 334 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 FAM24BQ8N5W8 94 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 IL22RA2Q969J5 263 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 PHYHIPLQ96FC7 376 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 MS4A5Q9H3V2 200 aa8.24□□□□□ -1.09
VTA1-205ENST00000620996 ABCA4P78363 2273 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 MED19A0JLT2 244 aaPredicted RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 MORN2Q502X0 79 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 SPINK9Q5DT21 86 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 UTF1Q5T230 341 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 EIF5AL1Q6IS14 154 aaKnown RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 SPNS3Q6ZMD2 512 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 LYG1Q8N1E2 194 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 STOML3Q8TAV4 291 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 HRH4Q9H3N8 390 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 A0A1B0GV50 99 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 IGSF23A1L1A6 192 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 M0R036 132 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 JTBO76095 146 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 PRH1P02810 166 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 RNF141Q8WVD5 230 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 SDSLQ96GA7 329 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 PRORYQ9H606 182 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 JPT1Q9UK76 154 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 ITPR1Q14643 2758 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 LINC00473A8K010 186 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 UQCRFS1P47985 274 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 RPS16P62249 146 aaKnown RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 RPL23AP62750 156 aaKnown RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 RPL31P62899 125 aaKnown RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 HTD2P86397 168 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 KIAA0141Q14154 515 aaPredicted RBP8.23□□□□□ -1.09
VTA1-205ENST00000620996 ZNF788Q6ZQV5 615 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 Q8TCH9 128 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 SLC25A31Q9H0C2 315 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 WFDC1Q9HC57 220 aa8.23□□□□□ -1.09
VTA1-205ENST00000620996 SPTBN1Q01082 2364 aaKnown RBP8.22□□□□□ -1.09
VTA1-205ENST00000620996 IGHV1-69-2A0A0G2JMI3 117 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 A0A1B0GU03 582 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 TMEM178BH3BS89 294 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 GPR157Q5UAW9 335 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 LYPD2Q6UXB3 125 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 H2BFWTQ7Z2G1 175 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 OR5C1Q8NGR4 320 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 ABHD14AQ9BUJ0 271 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 PIGBOS1A0A0B4J2F0 54 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 KBTBD11-OT1A0A1B0GTJ5 212 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 B9A039 149 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 NDUFB3O43676 98 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 ZG16O60844 167 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 CCL3L1P16619 93 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 RAB5CP51148 216 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 HNF4GQ14541 408 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 TMEM252Q8N6L7 170 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 GAR1Q9NY12 217 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms