RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FCN1O00602 326 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CHEK1O14757 476 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 NUPR1O60356 82 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CA11O75493 328 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 IGKV1D-33P01593 117 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 IGKV1-33P01594 117 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 COL8A2P25067 703 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CD81P60033 236 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 MEF2BQ02080 365 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 PNRC1Q12796 327 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TMEM211Q6ICI0 200 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 OR10X1Q8NGY0 326 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TMEM56Q96MV1 263 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 PARLQ9H300 379 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 SRD5A3Q9H8P0 318 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CISD1Q9NZ45 108 aaKnown RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 PAM16Q9Y3D7 125 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 RNF115Q9Y4L5 304 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TMEM56-RWDD3S4R434 201 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 PCNX2A6NKB5 2137 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TNCP24821 2201 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 RPL36A-HNRNPH2H7BZ11 118 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 SYNGR3O43761 229 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 IGLV3-1P01715 115 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 COX5BP10606 129 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CEACAM1P13688 526 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CTSSP25774 331 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CDC34P49427 236 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CAMPP49913 170 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 RAC3P60763 192 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 KCNMB1Q16558 191 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 FAM27BQ5VT28 67 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 FAM53AQ6NSI3 398 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 WFDC8Q8IUA0 241 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 CISD2Q8N5K1 135 aaKnown RBP5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TPRX1Q8N7U7 411 aa5.91□□□□□ -1.46
NEDD9-216ENST00000620854 TRBV24-1A0A075B6N3 115 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 CBY3A6NI87 242 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 TECTAO75443 2155 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 OTX1P32242 354 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 TFPI2P48307 235 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 UCP3P55916 312 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 TAS2R45P59539 299 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 NUFIP2Q7Z417 695 aaKnown RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 TUSC5Q8IXB3 177 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 OR2T10Q8NGZ9 312 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 NEU1Q99519 415 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 ZNF71Q9NQZ8 489 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 FKBP11Q9NYL4 201 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 NAT8Q9UHE5 227 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 PROCRQ9UNN8 238 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 CHCHD2Q9Y6H1 151 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 SERTM2A0A1B0GWG4 89 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 NKX2-8O15522 239 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 CST2P09228 141 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 UCP1P25874 307 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 AMTP48728 403 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 LINC00205P59089 165 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 HOXA4Q00056 320 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-216ENST00000620854 FOXO1Q12778 655 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 IQCJQ1A5X6 159 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 SMIM21Q3B7S5 101 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 MRGPRGQ86SM5 289 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 OR5R1Q8NH85 324 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 TBX15Q96SF7 602 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 C11orf1Q9H5F2 150 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 PPIAL4AQ9Y536 164 aa5.9□□□□□ -1.46
NEDD9-216ENST00000620854 ZIC3O60481 467 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 LIFP15018 202 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 SELEP16581 610 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 HNRNPA3P51991 378 aaKnown RBP5.9□□□□□ -1.47
NEDD9-216ENST00000620854 RND2P52198 227 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 SOX8P57073 446 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 PCOLCEQ15113 449 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 STUMQ69YW2 141 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 GFRALQ6UXV0 394 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 HAPLN4Q86UW8 402 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 CPEB3Q8NE35 698 aaKnown RBP5.9□□□□□ -1.47
NEDD9-216ENST00000620854 IMMP2LQ96T52 175 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 DERL1Q9BUN8 251 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 FOXJ2Q9P0K8 574 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 CLN8Q9UBY8 286 aa5.9□□□□□ -1.47
NEDD9-216ENST00000620854 TRGV8A0A0C4DH27 118 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NKX6-3A6NJ46 265 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 M0R143 59 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NPSP0C0P6 89 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 COX6A1P12074 109 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CRYGSP22914 178 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 MAGEA5P43359 124 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF83P51522 516 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ERHP84090 104 aaKnown RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 GCSAMLQ5JQS6 135 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF295-AS1Q8N0V1 137 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF525Q8N782 197 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NEIL1Q96FI4 390 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.89□□□□□ -1.474e-7■■■□□ 16.4
NEDD9-216ENST00000620854 LRP4O75096 1905 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms