RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 CRYAAP02489 173 aa13.4□□□□□ -0.26
SEMA3B-214ENST00000619119 C3orf79P0CE67 100 aa13.4□□□□□ -0.26
SEMA3B-214ENST00000619119 ESDP10768 282 aa13.4□□□□□ -0.26
SEMA3B-214ENST00000619119 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
SEMA3B-214ENST00000619119 NPIPB13A6NJU9 1138 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 NPIPB4C9JG80 1138 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 IAPPP10997 89 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 FCGR2AP12318 317 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 GDF1P27539 372 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 NEIL1Q96FI4 390 aaPredicted RBP13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 FCN1O00602 326 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 NRASP01111 189 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 KRASP01116 189 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 NTF3P20783 257 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 IZUMO4Q1ZYL8 232 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 MPV17L2Q567V2 206 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 PHYHD1Q5SRE7 291 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 SELENOHQ8IZQ5 122 aaKnown RBP13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 DNAJC13O75165 2243 aa13.39□□□□□ -0.27
SEMA3B-214ENST00000619119 OR7C2O60412 319 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 FRMD6-AS1P0C7T7 363 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 THBS3P49746 956 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 YPEL3P61236 119 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 PSG4Q00888 419 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 TBC1D26Q86UD7 250 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 HAPLN4Q86UW8 402 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 RPP25LQ8N5L8 163 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZIC4Q8N9L1 334 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 OR10V1Q8NGI7 309 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 WASHC3Q9Y3C0 194 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 SPTBN2O15020 2390 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 NCKAP5O14513 1909 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF407Q9C0G0 2248 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF121P58317 390 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ID3Q02535 119 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF90Q03938 601 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF114Q8NC26 417 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF816-ZNF321PA0A0X1KG74 233 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF17P17021 662 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 NPPCP23582 126 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 IER3P46695 156 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 RPS20P60866 119 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 ARL16Q0P5N6 197 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 LRRC10Q5BKY1 277 aa13.38□□□□□ -0.27
SEMA3B-214ENST00000619119 MDFIC2A0A1B0GVS7 189 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 ANGPTL7O43827 346 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 CXCL13O43927 109 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 PMP22Q01453 160 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 KIAA1644Q3SXP7 199 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 ABHD17BQ5VST6 288 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 NCOA6Q14686 2063 aaPredicted RBP13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 NPBWR2P48146 333 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 SRYQ05066 204 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
SEMA3B-214ENST00000619119 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 C5orf63A6NC05 138 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 VENTXO95231 258 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 DEFA4P12838 97 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 KITLGP21583 273 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 HLA-DRB5Q30154 266 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 STUMQ69YW2 141 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 SLC25A47Q6Q0C1 308 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 RCHY1Q96PM5 261 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 MRPL27Q9P0M9 148 aaKnown RBP13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF318Q5VUA4 2279 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 PTPRZ1P23471 2315 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 AHRRA9YTQ3 701 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 SNURFLB1AK76 121 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.277e-12■■□□□ 14.1
SEMA3B-214ENST00000619119 CELA3AP09093 270 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 SRD5A2P31213 254 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 B3GALT5-AS1P59052 145 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 SRPXP78539 464 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 PSG9Q00887 426 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 PRSS57Q6UWY2 283 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 MUC15Q8N387 334 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 OR5P3Q8WZ94 311 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 TMEM186Q96B77 213 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 GJE1A6NN92 205 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 FOXL1Q12952 345 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
SEMA3B-214ENST00000619119 MLNRO43193 412 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 FKBP2P26885 142 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms