RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CDK10Q15131 360 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MED22Q15528 200 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 PRSS8Q16651 343 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ZSCAN26Q16670 478 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ZNF585BQ52M93 769 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 KDM4DQ6B0I6 523 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 LAMTOR1Q6IAA8 161 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 RAB12Q6IQ22 244 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 Q6ZRM9 215 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CADM3Q8N126 398 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 ZNF383Q8NA42 475 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR52L2PQ8NGH6 319 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OR5D18Q8NGL1 313 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 OSR1Q8TAX0 266 aaPredicted RBP3.33□□□□□ -1.88
SNCA-213ENST00000618500 ABHD5Q8WTS1 349 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 TMEM190Q8WZ59 177 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 CXorf58Q96LI9 332 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 IL4I1Q96RQ9 567 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 NICN1Q9BSH3 213 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 TM2D1Q9BX74 207 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 COA4Q9NYJ1 87 aa3.33□□□□□ -1.88
SNCA-213ENST00000618500 MAGEB4O15481 346 aaPredicted RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 RBMXL2O75526 392 aaKnown RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 MAS1P04201 325 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 SPP1P10451 314 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 BDKRB2P30411 391 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 PPP1CCP36873 323 aaKnown RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 MSMO1Q15800 293 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 KCTD21Q4G0X4 260 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 MFSD4AQ8N468 514 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 OR51A4Q8NGJ6 313 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 OR4A5Q8NH83 315 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 VN1R17PQ8TDU5 208 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 FYTTD1Q96QD9 318 aaKnown RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 NEU1Q99519 415 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 RARRES2Q99969 163 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 UQCC2Q9BRT2 126 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 CENPOQ9BU64 300 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 SRMP19623 302 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 FCGR2BP31994 310 aaPredicted RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 ZNF93P35789 620 aaPredicted RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 ARL3P36405 182 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 RANBP1P43487 201 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 DAPP51397 102 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 HLA-DRB3P79483 266 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 VMA21Q3ZAQ7 101 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 TP53I3Q53FA7 332 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 TMEM236Q5W0B7 351 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 TCEANCQ8N8B7 351 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 NKAIN3Q8N8D7 197 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 OR10AC1Q8NH08 325 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 OR5AK2Q8NH90 309 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 UBALD1Q8TB05 177 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 CD300LFQ8TDQ1 290 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 NR1H4Q96RI1 486 aaPredicted RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 FAM103A1Q9BTL3 118 aaKnown RBP3.32□□□□□ -1.88
SNCA-213ENST00000618500 CABLES2Q9BTV7 478 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 TTTY10Q9BZA0 68 aa3.32□□□□□ -1.88
SNCA-213ENST00000618500 TRBV5-7A0A0A0MS05 114 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 TRAV39A0A0B4J263 110 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 TCRBV3S1A0A5B6 114 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 TEX22C9J3V5 150 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 DHFRP00374 187 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 CD2P06729 351 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 INAFM2P0DMQ5 153 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 SPSB3Q6PJ21 355 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 RBPMS2Q6ZRY4 209 aaKnown RBP3.31□□□□□ -1.88
SNCA-213ENST00000618500 MMD2Q8IY49 270 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 OR5T1Q8NG75 326 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 GRPEL2Q8TAA5 225 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 GPR148Q8TDV2 347 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 CCDC107Q8WV48 283 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 SRSF12Q8WXF0 261 aaKnown RBP3.31□□□□□ -1.88
SNCA-213ENST00000618500 ZNF355PQ9NSJ1 428 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 PRR13Q9NZ81 148 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 ZNF581Q9P0T4 197 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 IGLV11-55A0A075B6I3 123 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 TMEM189A5PLL7 270 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 SNTNA6NMZ2 147 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 NDUFA4O00483 81 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 PROP1O75360 226 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 ZBTB25P24278 435 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 PPP3R1P63098 170 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 RTL8BQ17RB0 113 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 RPL39P5Q59GN2 51 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 DDI2Q5TDH0 399 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 FAM90A2PQ658T7 463 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 SIGIRRQ6IA17 410 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 RPL22L1Q6P5R6 122 aaKnown RBP3.31□□□□□ -1.88
SNCA-213ENST00000618500 Q6ZS49 121 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 UXS1Q8NBZ7 420 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 OR11H2Q8NH07 326 aa3.31□□□□□ -1.88
SNCA-213ENST00000618500 ZNF502Q8TBZ5 544 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms