RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 BEX2Q9BXY8 128 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 OR51J1Q9H342 316 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 PRDM13Q9H4Q3 707 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 BEX1Q9HBH7 125 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 CACFD1Q9UGQ2 172 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.9
TARDBP-217ENST00000616545 CSMD2Q7Z408 3487 aa9.4□□□□□ -0.91
TARDBP-217ENST00000616545 A0A0A6YYJ9 748 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 H7C2Y5 167 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 LY6G6DO95868 133 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 FGF2P09038 288 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 NQO2P16083 231 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 SRP14P37108 136 aaKnown RBP9.39□□□□□ -0.91
TARDBP-217ENST00000616545 LPAR6P43657 344 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 ERVK-16P61578 105 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 DIAPH2-AS1Q14236 149 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 POU2AF1Q16633 256 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 ZNF585BQ52M93 769 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 RUSC1-AS1Q66K80 236 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 OR8H1Q8NGG4 311 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 OR2T10Q8NGZ9 312 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 CASTOR1Q8WTX7 329 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 CFHR4Q92496 578 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 TSNAXQ99598 290 aaKnown RBP9.39□□□□□ -0.91
TARDBP-217ENST00000616545 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 RAB18Q9NP72 206 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 TMED3Q9Y3Q3 217 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
TARDBP-217ENST00000616545 IGHV3OR16-10A0A075B7F0 116 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 A0A0U1RQK1 487 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 DBX1A6NMT0 343 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 SSNA1O43805 119 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 VENTXO95231 258 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 SPDEFO95238 335 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 MOSP00540 346 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 IFNA21P01568 189 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 HLA-GP17693 338 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 VDAC1P21796 283 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 BRWD1-AS2P59051 145 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 LRRC75BQ2VPJ9 315 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 SP6Q3SY56 376 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 LIN54Q6MZP7 749 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 SELENOHQ8IZQ5 122 aaKnown RBP9.38□□□□□ -0.91
TARDBP-217ENST00000616545 OR52B4Q8NGK2 314 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 VSTM2AQ8TAG5 236 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 LSM10Q969L4 123 aaKnown RBP9.38□□□□□ -0.91
TARDBP-217ENST00000616545 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
TARDBP-217ENST00000616545 GPHA2Q96T91 129 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 C1RLQ9NZP8 487 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 PITPNC1Q9UKF7 332 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 CSPG4Q6UVK1 2322 aa9.38□□□□□ -0.91
TARDBP-217ENST00000616545 A0A0B4J293 547 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 BTBD17A6NE02 478 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 SHOXO15266 292 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 RAMP3O60896 148 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 CRYZL1O95825 349 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 TRAPPC2P0DI81 140 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 TRAPPC2BP0DI82 140 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 SLC25A6P12236 298 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 RPS16P62249 146 aaKnown RBP9.37□□□□□ -0.91
TARDBP-217ENST00000616545 ANKRD55Q3KP44 614 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 C16orf82Q7Z2V1 217 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 OR4A5Q8NH83 315 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 HARBI1Q96MB7 349 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 SPIN2AQ99865 258 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 SPIN2BQ9BPZ2 258 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 MED28Q9H204 178 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
TARDBP-217ENST00000616545 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
TARDBP-217ENST00000616545 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 S1PR2O95136 353 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 IGKV1D-33P01593 117 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 IGKV1-33P01594 117 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 AKR1C2P52895 323 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 LINC00205P59089 165 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-217ENST00000616545 CYCSP99999 105 aaKnown RBP9.36□□□□□ -0.91
TARDBP-217ENST00000616545 VMA21Q3ZAQ7 101 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 OR2B11Q5JQS5 317 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 Q6YL49 198 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 H2BFWTQ7Z2G1 175 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 TMEM86BQ8N661 226 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 SLC35G3Q8N808 338 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 TEX45Q8NA69 505 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 NPBQ8NG41 125 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 RNASE11Q8TAA1 199 aaKnown RBP9.36□□□□□ -0.91
TARDBP-217ENST00000616545 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 C17orf50Q8WW18 174 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 R3HDM4Q96D70 268 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 SEC22AQ96IW7 307 aa9.36□□□□□ -0.91
TARDBP-217ENST00000616545 RHOVQ96L33 236 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms