RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RPS19P39019 145 aaKnown RBP10.92□□□□□ -0.66
TCF4-248ENST00000616053 VAX2Q9UIW0 290 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
TCF4-248ENST00000616053 NCOR1O75376 2440 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 H3BMM0 161 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 GPX2P18283 190 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
TCF4-248ENST00000616053 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 CYB5R1Q9UHQ9 305 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 RPS11P62280 158 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCF4-248ENST00000616053 SERF2P84101 59 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 VCX2Q9H322 139 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 MMP26Q9NRE1 261 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 RBFOX3A6NFN3 312 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 IGKV1D-33P01593 117 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 IGKV1-33P01594 117 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 PNLIPP16233 465 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 ZFAND2BQ8WV99 257 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 TGIF2-C20orf24A0A0A6YYL0 155 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 VENTXO95231 258 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 CELA2BP08218 269 aaPredicted RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 PSG2P11465 335 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 FAM110DQ8TAY7 271 aaPredicted RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 ASB10Q8WXI3 467 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 AICDAQ9GZX7 198 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 RRHO14718 337 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 TMEM249Q2WGJ8 235 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 SLC25A2Q9BXI2 301 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 FUT9Q9Y231 359 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 DUSP14O95147 198 aaKnown RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 PXMP4Q9Y6I8 212 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 SNED1Q8TER0 1413 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 TRAV24A0A0B4J272 114 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 TRGC2P03986 189 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 RELAQ04206 551 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 UCN2Q96RP3 112 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 BCL2L10Q9HD36 194 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 ZNF275Q9NSD4 429 aaPredicted RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 S4R3C0 116 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 ASPDHA6ND91 283 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 R3HDMLQ9H3Y0 253 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 VWC2LB2RUY7 222 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 H3BTX0 84 aa10.91□□□□□ -0.66
TCF4-248ENST00000616053 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
TCF4-248ENST00000616053 NPIPB8E9PQR5 432 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 NPIPB9F8W1W9 429 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 NPIPB7O75200 414 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 LSM6P62312 80 aaKnown RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 MGAT2Q10469 447 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 PEAR1Q5VY43 1037 aaPredicted RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 MDS2Q8NDY4 140 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 HSF4Q9ULV5 492 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 COL14A1Q05707 1796 aaKnown RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 F5P12259 2224 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 PTP4A3O75365 173 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 APOMO95445 188 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 SLC25A38Q96DW6 304 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 ZNF48Q96MX3 618 aaPredicted RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 NPCDR1Q9BY65 106 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 CTSVO60911 334 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 DSCR9P59020 149 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 SRSF6Q13247 344 aaKnown RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 PARP4Q9UKK3 1724 aaKnown RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 SLC25A1P53007 311 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 ZNF506Q5JVG8 444 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 DEGS2Q6QHC5 323 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.66
TCF4-248ENST00000616053 HOGA1Q86XE5 327 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 DDA1Q9BW61 102 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 WDR54Q9H977 334 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 G6PC2Q9NQR9 355 aa10.9□□□□□ -0.66
TCF4-248ENST00000616053 A0A0U1RRA0 63 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 PIGYQ3MUY2 71 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 DKK4Q9UBT3 224 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 ASB1Q9Y576 335 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 MMP9P14780 707 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 COL9A1P20849 921 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 ZP3P21754 424 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 RNF182Q8N6D2 247 aa10.9□□□□□ -0.67
TCF4-248ENST00000616053 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 FAM24BQ8N5W8 94 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 PYCARD-AS1I3L0S3 204 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 PPYP01298 95 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 SERGEFQ9UGK8 458 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 PAX4O43316 350 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 ZNRF1Q8ND25 227 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
TCF4-248ENST00000616053 GOLT1AQ6ZVE7 132 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 TMEM186Q96B77 213 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 CEACAM1P13688 526 aa10.89□□□□□ -0.67
TCF4-248ENST00000616053 C10orf35Q96D05 121 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms