RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C19orf24Q9BVV8 132 aa12.58□□□□□ -0.4
SNPH-203ENST00000614659 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 DDTP30046 118 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 TBR1Q16650 682 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 CXorf66Q5JRM2 361 aaPredicted RBP12.57□□□□□ -0.4
SNPH-203ENST00000614659 ARTNQ5T4W7 220 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 SLC25A28Q96A46 364 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 DMRT1Q9Y5R6 373 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 KCNAB3O43448 404 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 FAM157CP0CG43 387 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 COMPP49747 757 aaPredicted RBP12.57□□□□□ -0.4
SNPH-203ENST00000614659 RUNX1Q01196 453 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 ITLN1Q8WWA0 313 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 C5orf52A6NGY3 159 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 IFITM10A6NMD0 228 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 GLRXP35754 106 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 ZNF818PQ6ZRF7 136 aa12.57□□□□□ -0.4
SNPH-203ENST00000614659 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 SIGLEC12Q96PQ1 595 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
SNPH-203ENST00000614659 EIF3GO75821 320 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNPH-203ENST00000614659 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 TREM2Q9NZC2 230 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 TRGC2P03986 189 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 PSMB2P49721 201 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 CACNA1CQ13936 2221 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 RHBDL1O75783 438 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 DSCR9P59020 149 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
SNPH-203ENST00000614659 KNTC1P50748 2209 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 DOCK4Q8N1I0 1966 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 IGHV3OR15-7A0A075B7D8 119 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 ODAMA1E959 279 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 SIAH2O43255 324 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 ACSF3Q4G176 576 aaPredicted RBP12.55□□□□□ -0.4
SNPH-203ENST00000614659 Q8WTZ3 238 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 RTBDNQ9BSG5 229 aaPredicted RBP12.55□□□□□ -0.4
SNPH-203ENST00000614659 TLNRD1Q9H1K6 362 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 LOC105371242A0A075B767 164 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 HERVK_113P61574 105 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 PCSK4Q6UW60 755 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 OR4B1Q8NGF8 309 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 ASCL3Q9NQ33 180 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 IGKV1D-43A0A0B4J1Z2 117 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 FAM157AC9JC47 383 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 GNG7O60262 68 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 ZIC3O60481 467 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 TMEM208Q9BTX3 173 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 CHODLQ9H9P2 273 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 RPL7P18124 248 aaKnown RBP12.55□□□□□ -0.4
SNPH-203ENST00000614659 ID1P41134 155 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 RSG1Q9BU20 258 aa12.55□□□□□ -0.4
SNPH-203ENST00000614659 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
SNPH-203ENST00000614659 MMDQ15546 238 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 KLF14Q8TD94 323 aaPredicted RBP12.54□□□□□ -0.4
SNPH-203ENST00000614659 RHOVQ96L33 236 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 UMODP07911 640 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 PAXXQ9BUH6 204 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 CALYQ9NYX4 217 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
SNPH-203ENST00000614659 LIPFP07098 398 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 UCP1P25874 307 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 GGACTQ9BVM4 153 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 WDR81Q562E7 1941 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 CCL13Q99616 98 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 HIGD1AQ9Y241 93 aa12.54□□□□□ -0.4
SNPH-203ENST00000614659 IL18BPO95998 194 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 GTF3AQ92664 365 aaKnown RBP12.53□□□□□ -0.4
SNPH-203ENST00000614659 OR4C12Q96R67 309 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 TRAV14DV4A0A0A6YYC5 116 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 IGHV3-13P01766 116 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 IGHV3-7P01780 117 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
SNPH-203ENST00000614659 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
SNPH-203ENST00000614659 CALHM1Q8IU99 346 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 LINC01560Q8TB33 94 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 COL8A1P27658 744 aa12.53□□□□□ -0.4
SNPH-203ENST00000614659 SPATA45Q537H7 98 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms