RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ZNF45Q02386 682 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 MED21Q13503 144 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 VMA21Q3ZAQ7 101 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
CSNK1E-215ENST00000612795 TRBV6-6A0A0A6YYG2 114 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 OR2J3O76001 311 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 OR2C1O95371 312 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 TM4SF20Q53R12 229 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 TMEM177Q53S58 311 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 GLT8D1Q68CQ7 371 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 Q6ZWC4 215 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 GGHQ92820 318 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 KCNK15Q9H427 330 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-215ENST00000612795 ACTL6BO94805 426 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 MAPK3P27361 379 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 RASSF2P50749 326 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 TAS2R43P59537 309 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 PRSS8Q16651 343 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 IDO2Q6ZQW0 420 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 TM2D1Q9BX74 207 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 C12orf4Q9NQ89 552 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 MLXQ9UH92 298 aa12.82□□□□□ -0.36
CSNK1E-215ENST00000612795 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 SRRM4A7MD48 611 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 WBP4O75554 376 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 UBE2KP61086 200 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 TAGLNQ01995 201 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 UNC119Q13432 240 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 MRGPRG-AS1Q2M3A8 158 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 BTNL8Q6UX41 500 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 TEX45Q8NA69 505 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 OR1L6Q8NGR2 347 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 Q9N2K0 584 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 SDHAF2Q9NX18 166 aa12.81□□□□□ -0.36
CSNK1E-215ENST00000612795 VPS13DQ5THJ4 4388 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 CREBL2O60519 120 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 RRASP10301 218 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 SRMP19623 302 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 ARL3P36405 182 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 TTC23Q5W5X9 447 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 RBPMS2Q6ZRY4 209 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 GPHB5Q86YW7 130 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 C9orf16Q9BUW7 83 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
CSNK1E-215ENST00000612795 DNAH6Q9C0G6 4158 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 IGKV1-6A0A0C4DH72 117 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 A8MWP6 167 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 UBE2CO00762 179 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 CRYZL1O95825 349 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 IGHV3-23P01764 117 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 CELP19835 753 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 SERPINB10P48595 397 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 RBM48Q5RL73 367 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 SLC25A42Q86VD7 318 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 TTC9CQ8N5M4 171 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 URM1Q9BTM9 101 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 ZNF430Q9H8G1 570 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-215ENST00000612795 SOCS1O15524 211 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 TPBGQ13641 420 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 C10orf55Q5SWW7 151 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 SLC38A6Q8IZM9 456 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 RNF183Q96D59 192 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 CMSS1Q9BQ75 279 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 UBQLN2Q9UHD9 624 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 FBXL7Q9UJT9 491 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 RBM7Q9Y580 266 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-215ENST00000612795 MUC4Q99102 2169 aa12.77□□□□□ -0.36
CSNK1E-215ENST00000612795 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 TMEM14DPA8MWL7 114 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 TRDCB7Z8K6 153 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 BET1O15155 118 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 CEACAM19Q7Z692 300 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 ZNF485Q8NCK3 441 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 FBLIM1Q8WUP2 373 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 CCDC140Q96MF4 163 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 S4R3C0 116 aa12.77□□□□□ -0.37
CSNK1E-215ENST00000612795 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
CSNK1E-215ENST00000612795 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
CSNK1E-215ENST00000612795 DPPA5A6NC42 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms