RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 C9orf170A2RU37 121 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 H0YJW9 148 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 CRYZL1O95825 349 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 IL5P05113 134 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 BRS3P32247 399 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 RAB13P51153 203 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 SUPT4H1P63272 117 aaKnown RBP10.34□□□□□ -0.75
PRKN-210ENST00000612540 HES1Q14469 280 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 UXS1Q8NBZ7 420 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 AJUBAQ96IF1 538 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 ALX4Q9H161 411 aaPredicted RBP10.34□□□□□ -0.75
PRKN-210ENST00000612540 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
PRKN-210ENST00000612540 CREBL2O60519 120 aaPredicted RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 RRASP10301 218 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 CD24P25063 80 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 MC5RP33032 325 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 LPAR6P43657 344 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 MECP2P51608 486 aaKnown RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 TAGLNQ01995 201 aaKnown RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 DHODHQ02127 395 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 DEFB112Q30KQ8 113 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 LIN54Q6MZP7 749 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 TCTEX1D1Q8N7M0 179 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 OR5AN1Q8NGI8 311 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 RNASE11Q8TAA1 199 aaKnown RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 CD300LFQ8TDQ1 290 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 ZNF431Q8TF32 576 aaPredicted RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 DDB2Q92466 427 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
PRKN-210ENST00000612540 GALNT14Q96FL9 552 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 TMEM222Q9H0R3 208 aa10.33□□□□□ -0.76
PRKN-210ENST00000612540 hCG_2014768A0A024R1R8 64 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 A0A0B4J293 547 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 SSNA1O43805 119 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 RAMP3O60896 148 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 S1PR2O95136 353 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 VENTXO95231 258 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 IGKV1D-33P01593 117 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 IGKV1-33P01594 117 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
PRKN-210ENST00000612540 RPA2P15927 270 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 UCP1P25874 307 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 RPS16P62249 146 aaKnown RBP10.32□□□□□ -0.76
PRKN-210ENST00000612540 SRPXP78539 464 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 HNF4GQ14541 408 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 TMEM187Q14656 261 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 LRRC75BQ2VPJ9 315 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 ANKRD55Q3KP44 614 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 DHRS7BQ6IAN0 325 aaPredicted RBP10.32□□□□□ -0.76
PRKN-210ENST00000612540 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 PDPNQ86YL7 162 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 LGI3Q8N145 548 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 CFHR4Q92496 578 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 PHB2Q99623 299 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
PRKN-210ENST00000612540 A0A0A6YYJ9 748 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 SHOXO15266 292 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 RBFOX2O43251 390 aaKnown RBP eCLIP10.31□□□□□ -0.76
PRKN-210ENST00000612540 DUS4LO95620 317 aaKnown RBP10.31□□□□□ -0.76
PRKN-210ENST00000612540 IGKV1-16P04430 117 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 SRD5A1P18405 259 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 CD1BP29016 333 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 AKR1C2P52895 323 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 ERVK-16P61578 105 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 Q6ZNX1 250 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 C9orf139Q6ZV77 190 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 C12orf45Q8N5I9 185 aaPredicted RBP10.31□□□□□ -0.76
PRKN-210ENST00000612540 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 FLYWCH2Q96CP2 140 aaKnown RBP10.31□□□□□ -0.76
PRKN-210ENST00000612540 SSX3Q99909 188 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 OR51J1Q9H342 316 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 CDC42EP3Q9UKI2 254 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 ANK2Q01484 3957 aa10.31□□□□□ -0.76
PRKN-210ENST00000612540 C7orf66A4D0T2 115 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 BTBD17A6NE02 478 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 H3BUX3 64 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 HPRT1P00492 218 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 MOSP00540 346 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 TMEM11P17152 192 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 BRWD1-AS2P59051 145 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 ZNF585BQ52M93 769 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 SSX9Q7RTT3 188 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 DMBX1Q8NFW5 382 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 OR2T10Q8NGZ9 312 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 LHFPL5Q8TAF8 219 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
PRKN-210ENST00000612540 R3HDM4Q96D70 268 aa10.3□□□□□ -0.76
PRKN-210ENST00000612540 MEGF9Q9H1U4 602 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms