RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 OR10D4PQ8NGN7 298 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 IL19Q9UHD0 177 aa11.1□□□□□ -0.63
TCF3-220ENST00000611869 FABP4P15090 132 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 TOLLIPQ9H0E2 274 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 CUL9Q8IWT3 2517 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 KIAA1549LQ6ZVL6 1849 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 FAM90A26D6RGX4 464 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 CD40P25942 277 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 HABP2Q14520 560 aaPredicted RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 RNF212Q495C1 297 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 FAM216BQ8N7L0 139 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 OR8B3Q8NGG8 313 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 OR8B2Q96RD0 313 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 CFPP27918 469 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 KIR2DL2P43627 348 aaPredicted RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 RTP5Q14D33 572 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 RSPO1Q2MKA7 263 aaPredicted RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 ZCCHC24Q8N2G6 241 aaKnown RBP11.09□□□□□ -0.63
TCF3-220ENST00000611869 NPVFQ9HCQ7 196 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 MED13Q9UHV7 2174 aa11.09□□□□□ -0.63
TCF3-220ENST00000611869 NTF3P20783 257 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 GNG4P50150 75 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 SLC16A13Q7RTY0 426 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 C18orf12Q96KH6 178 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.63
TCF3-220ENST00000611869 RPL11P62913 178 aaKnown RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 WDR82Q6UXN9 313 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 ZGRF1Q86YA3 2104 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 GINS3Q9BRX5 216 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 IDI2-AS1Q9NZ38 188 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 LURAP1Q96LR2 239 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 SEBOXQ9HB31 216 aaPredicted RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 TRAPPC1Q9Y5R8 145 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 NCOA6Q14686 2063 aaPredicted RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 ASCL5Q7RTU5 278 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 DIRC2Q96SL1 478 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 SCNM1Q9BWG6 230 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 SMDT1Q9H4I9 107 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 TECRQ9NZ01 308 aaKnown RBP11.08□□□□□ -0.64
TCF3-220ENST00000611869 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
TCF3-220ENST00000611869 PCNX3Q9H6A9 2034 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 CT45A10P0DMU9 189 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 CSRP1P21291 193 aaKnown RBP11.07□□□□□ -0.64
TCF3-220ENST00000611869 S100A7P31151 101 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
TCF3-220ENST00000611869 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 AP4M1O00189 453 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
TCF3-220ENST00000611869 CSN1S1P47710 185 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 OR2T10Q8NGZ9 312 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 FAM216AQ8WUB2 273 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 QTRT1Q9BXR0 403 aaKnown RBP11.07□□□□□ -0.64
TCF3-220ENST00000611869 IGHV1-18A0A0C4DH31 117 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 GFRA3O60609 400 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 LYZP61626 148 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 LINC01560Q8TB33 94 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 FAM57AQ8TBR7 257 aa11.07□□□□□ -0.64
TCF3-220ENST00000611869 HSPB1P04792 205 aaKnown RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 UCNP55089 124 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 ZNF497Q6ZNH5 498 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 HIF1ANQ9NWT6 349 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 AMMECR1Q9Y4X0 333 aaPredicted RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 TIMM9Q9Y5J7 89 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 PSPNO60542 156 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 CEACAM3P40198 252 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 FAM103A1Q9BTL3 118 aaKnown RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 PHOX2AO14813 284 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 OR10J1P30954 320 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 HSPE1P61604 102 aaKnown RBP11.06□□□□□ -0.64
TCF3-220ENST00000611869 MMDQ15546 238 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 Q56UQ5 140 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 UBTD1Q9HAC8 227 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 CREBBPQ92793 2442 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 NAPSAO96009 420 aa11.06□□□□□ -0.64
TCF3-220ENST00000611869 RAB4AP20338 218 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms