RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RHOBP62745 196 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 Q6ZRM9 215 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 MMD2Q8IY49 270 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 NPIPA1Q9UND3 350 aa10.63□□□□□ -0.71
CTCFL-218ENST00000608440 COL4A2P08572 1712 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 FBLL1A6NHQ2 334 aaKnown RBP10.62□□□□□ -0.71
CTCFL-218ENST00000608440 TNFP01375 233 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 OR10J4P0C629 311 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 HSD52Q0P140 79 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 FOXE3Q13461 319 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 PIGYQ3MUY2 71 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 Q6ZS52 159 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 CA13Q8N1Q1 262 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 RAB40CQ96S21 281 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 CDX2Q99626 313 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-218ENST00000608440 TGFBR3LH3BV60 316 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 BMPR1BO00238 502 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 RER1O15258 196 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 APOA2P02652 100 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 CD38P28907 300 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 PSG3Q16557 428 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 DCAF12Q5T6F0 453 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 CCDC144NLQ6NUI1 221 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
CTCFL-218ENST00000608440 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 C1orf122Q6ZSJ8 110 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 BHLHA15Q7RTS1 189 aaPredicted RBP10.62□□□□□ -0.71
CTCFL-218ENST00000608440 OR1F12Q8NHA8 337 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 NUDT22Q9BRQ3 303 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 GNB1LQ9BYB4 327 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 LYRM4Q9HD34 91 aa10.62□□□□□ -0.71
CTCFL-218ENST00000608440 SYNGR2O43760 224 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
CTCFL-218ENST00000608440 PVRP15151 417 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 PRSS12P56730 875 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 RAC3P60763 192 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 SLC38A11Q08AI6 406 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 Q6ZPA2 131 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 OR51H1Q8NH63 302 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 OR10G6Q8NH81 332 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 NPFFR1Q9GZQ6 430 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 GEMIN7Q9H840 131 aaKnown RBP10.61□□□□□ -0.71
CTCFL-218ENST00000608440 CCL28Q9NRJ3 127 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 SS18L2Q9UHA2 77 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 SCO2A0A1W2PP80 73 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 PDE6DO43924 150 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 REG1AP05451 166 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 DAP3P51398 398 aaKnown RBP10.61□□□□□ -0.71
CTCFL-218ENST00000608440 ADAMTSL4Q6UY14 1074 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 DOK3Q7L591 496 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 CACNG5Q9UF02 275 aa10.61□□□□□ -0.71
CTCFL-218ENST00000608440 PTRH2Q9Y3E5 179 aaKnown RBP10.61□□□□□ -0.71
CTCFL-218ENST00000608440 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 H0YGG7 62 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 K7EN84 100 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 DEGS1O15121 323 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 UTS2O95399 124 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 RPS21P63220 83 aaKnown RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 MRPS21P82921 87 aaKnown RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 TFF2Q03403 129 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 FNDC7Q5VTL7 733 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 DTX1Q86Y01 620 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 RAB37Q96AX2 223 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 TM4SF19Q96DZ7 209 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 MCRIP2Q9BUT9 160 aaKnown RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 CLCF1Q9UBD9 225 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 AGFG2O95081 481 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 CYC1P08574 325 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 LINC00869P0C866 280 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 MGST1P10620 155 aaKnown RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 OR1D5P58170 312 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 TMEM136Q6ZRR5 245 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 MRPL21Q7Z2W9 205 aaKnown RBP10.6□□□□□ -0.71
CTCFL-218ENST00000608440 OR8B3Q8NGG8 313 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 OR2K2Q8NGT1 345 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 OR8B2Q96RD0 313 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 HS3ST3A1Q9Y663 406 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 CNTRLQ7Z7A1 2325 aa10.6□□□□□ -0.71
CTCFL-218ENST00000608440 A0A0G2JMM0 328 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 A0A1W2PPB8 328 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 KIR3DP1A8MWS1 328 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 NPIPA3F8WFD2 350 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 K7EP34 96 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 SRFP11831 508 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 RAB31Q13636 194 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 RNASEKQ6P5S7 137 aaKnown RBP10.59□□□□□ -0.71
CTCFL-218ENST00000608440 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 LMX1AQ8TE12 382 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 RERGQ96A58 199 aaPredicted RBP10.59□□□□□ -0.71
CTCFL-218ENST00000608440 SPSB1Q96BD6 273 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 COPS7AQ9UBW8 275 aa10.59□□□□□ -0.71
CTCFL-218ENST00000608440 COL6A3P12111 3177 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms