RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 FAM90A26D6RGX4 464 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 GPR137BO60478 399 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 IL3RAP26951 378 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 ERVK-16P61578 105 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 ARF6P62330 175 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 EXOSC2Q13868 293 aaKnown RBP17.58■□□□□ 0.4
USP6NL-204ENST00000606752 CLDND2Q8NHS1 167 aa17.58■□□□□ 0.4
USP6NL-204ENST00000606752 ZNF471Q9BX82 626 aaPredicted RBP17.58■□□□□ 0.4
USP6NL-204ENST00000606752 CRYZL1O95825 349 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 IGLV1-47P01700 117 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 ZFP36P26651 326 aaKnown RBP17.57■□□□□ 0.4
USP6NL-204ENST00000606752 ATP5J2P56134 94 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 LMO4P61968 165 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 TAGLNQ01995 201 aaKnown RBP17.57■□□□□ 0.4
USP6NL-204ENST00000606752 RTL8BQ17RB0 113 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 OR2C3Q8N628 320 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 Q8N7P7 452 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 BEND2Q8NDZ0 799 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 FAM168AQ92567 244 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 MRPL20Q9BYC9 149 aaKnown RBP17.57■□□□□ 0.4
USP6NL-204ENST00000606752 SLC35D1Q9NTN3 355 aa17.57■□□□□ 0.4
USP6NL-204ENST00000606752 FAM90A9PA6NNJ1 464 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 SYNGR2O43760 224 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 PLA2G2AP14555 144 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 ARHGDIBP52566 201 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 DLX1P56177 255 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 UBA52P62987 128 aaKnown RBP17.56■□□□□ 0.4
USP6NL-204ENST00000606752 DHRS7BQ6IAN0 325 aaPredicted RBP17.56■□□□□ 0.4
USP6NL-204ENST00000606752 RAB40CQ96S21 281 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 UBQLN2Q9UHD9 624 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 NDUFS8O00217 210 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 TAAR5O14804 337 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 SPDEFO95238 335 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 TMEM50AO95807 157 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 HLA-DRB5Q30154 266 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 C1orf122Q6ZSJ8 110 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 OR5AN1Q8NGI8 311 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 ST8SIA2Q92186 375 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 PIMREGQ9BSJ6 248 aa17.56■□□□□ 0.4
USP6NL-204ENST00000606752 LYRM2Q9NU23 88 aaPredicted RBP17.56■□□□□ 0.4
USP6NL-204ENST00000606752 ENSAO43768 121 aaKnown RBP17.55■□□□□ 0.4
USP6NL-204ENST00000606752 RRASP10301 218 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 TNFRSF9Q07011 255 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 SSX9Q7RTT3 188 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 OR13D1Q8NGV5 346 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 CYTL1Q9NRR1 136 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 HSPB7Q9UBY9 170 aa17.55■□□□□ 0.4
USP6NL-204ENST00000606752 A8MXK9 166 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 J3QKU1 62 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 HRASP01112 189 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 APOA2P02652 100 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 PRTN3P24158 256 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 COX7A1P24310 79 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 REG1BP48304 166 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 CAV2P51636 162 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 PAX9P55771 341 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 DIAPH2-AS1Q14236 149 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 TGIF2LXQ8IUE1 241 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 VKORC1L1Q8N0U8 176 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 KIR3DL3Q8N743 410 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 C10orf105Q8TEF2 133 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 NABP2Q9BQ15 211 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 SLC25A31Q9H0C2 315 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 SPG11Q96JI7 2443 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 FAM24AA6NFZ4 105 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 H0YJW9 148 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 OR9G9P0C7N8 305 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 PAX1P15863 534 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 UBE2KP61086 200 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 PRB3Q04118 309 aaPredicted RBP17.54■□□□□ 0.4
USP6NL-204ENST00000606752 POU2AF1Q16633 256 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 CLEC2AQ6UVW9 174 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 RHOVQ96L33 236 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 PCGF1Q9BSM1 259 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 WSB1Q9Y6I7 421 aa17.54■□□□□ 0.4
USP6NL-204ENST00000606752 BUB1B-PAK6H3BSN5 160 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 RBMXL2O75526 392 aaKnown RBP17.53■□□□□ 0.4
USP6NL-204ENST00000606752 MED6O75586 246 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 IGKV1-16P04430 117 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 RPL23AP62750 156 aaKnown RBP17.53■□□□□ 0.4
USP6NL-204ENST00000606752 LCN2P80188 198 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 PAX2Q02962 417 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 NDUFA5Q16718 116 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 PNKDQ8N490 385 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 TMEM252Q8N6L7 170 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 STOML3Q8TAV4 291 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 NRGNQ92686 78 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 TMEM140Q9NV12 185 aa17.53■□□□□ 0.4
USP6NL-204ENST00000606752 ARHGAP32A7KAX9 2087 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 EWSR1Q01844 656 aaKnown RBP eCLIP17.52■□□□□ 0.4
USP6NL-204ENST00000606752 NHLH2Q02577 135 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 AARDQ4LEZ3 155 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 ALKAL2Q6UX46 152 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 OR8H3Q8N146 312 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 OR11H6Q8NGC7 330 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 AIFM2Q9BRQ8 373 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 SIRT7Q9NRC8 400 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 FBXL17Q9UF56 701 aa17.52■□□□□ 0.4
USP6NL-204ENST00000606752 AMMECR1Q9Y4X0 333 aaPredicted RBP17.52■□□□□ 0.4
USP6NL-204ENST00000606752 KPTNQ9Y664 436 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms