RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TCF19Q9Y242 345 aa6.15□□□□□ -1.42
MSH6-211ENST00000606499 PRELID3BQ9Y3B1 194 aa6.15□□□□□ -1.42
MSH6-211ENST00000606499 WASHC3Q9Y3C0 194 aa6.15□□□□□ -1.42
MSH6-211ENST00000606499 TEX13DA0A0J9YY54 714 aaPredicted RBP6.14□□□□□ -1.43
MSH6-211ENST00000606499 C3orf85A0A1B0GTC6 90 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 A6NDX4 124 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 BTBD17A6NE02 478 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 CRYM-AS1A6NIL9 109 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 RNF212BA8MTL3 300 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 MPPED1O15442 326 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 S1PR2O95136 353 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 MOSP00540 346 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 VSIG10L2P0DP72 767 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 ANXA7P20073 488 aaKnown RBP6.14□□□□□ -1.43
MSH6-211ENST00000606499 S100GP29377 79 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 MC5RP33032 325 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 HILS1P60008 231 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 SUPT4H1P63272 117 aaKnown RBP6.14□□□□□ -1.43
MSH6-211ENST00000606499 CBX3Q13185 183 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 EBI3Q14213 229 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 RTL8BQ17RB0 113 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 SP6Q3SY56 376 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 ZNF585BQ52M93 769 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 PDPNQ86YL7 162 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 LURAP1LQ8IV03 231 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 Q8N6K4 173 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 OR2T10Q8NGZ9 312 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 OR4S2Q8NH73 311 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 OR5R1Q8NH85 324 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 NAA60Q9H7X0 242 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 BEX1Q9HBH7 125 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 PRR13Q9NZ81 148 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 POMT1Q9Y6A1 747 aa6.14□□□□□ -1.43
MSH6-211ENST00000606499 H0Y980 276 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 RBFOX2O43251 390 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■□□□□ 8.9
MSH6-211ENST00000606499 TCF21O43680 179 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 GPR137BO60478 399 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 PTTG1O95997 202 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 IGKV1-39P01597 117 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 IGKV1D-39P04432 117 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 OR5AC1P0C628 307 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 RRASP10301 218 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 RPA2P15927 270 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 VAMP1P23763 118 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 F2RL1P55085 397 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 RAB25P57735 213 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 UBA52P62987 128 aaKnown RBP6.13□□□□□ -1.43
MSH6-211ENST00000606499 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
MSH6-211ENST00000606499 PPP1R1AQ13522 171 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 MMDQ15546 238 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 DHRS7BQ6IAN0 325 aaPredicted RBP6.13□□□□□ -1.43
MSH6-211ENST00000606499 SLC25A42Q86VD7 318 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 THNSL2Q86YJ6 484 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 SGPP2Q8IWX5 399 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 VKORC1L1Q8N0U8 176 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 TMEM86BQ8N661 226 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 DUSP18Q8NEJ0 188 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 OR4C13Q8NGP0 309 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 FLYWCH2Q96CP2 140 aaKnown RBP6.13□□□□□ -1.43
MSH6-211ENST00000606499 HARBI1Q96MB7 349 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 RBM14Q96PK6 669 aaKnown RBP6.13□□□□□ -1.43
MSH6-211ENST00000606499 SCGB3A2Q96PL1 93 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 PLSCR3Q9NRY6 295 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 PITPNC1Q9UKF7 332 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 NUBP2Q9Y5Y2 271 aa6.13□□□□□ -1.43
MSH6-211ENST00000606499 SH2D7A6NKC9 451 aaPredicted RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 NCBP2LA6PVI3 153 aaKnown RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 SRRM4A7MD48 611 aaKnown RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 SHOXO15266 292 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 NBR2O15453 112 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 SLC25A17O43808 307 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 OR2F2O95006 317 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 IGLV2-23P01705 113 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 HLA-AP01891 365 aaKnown RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 SERPINE2P07093 398 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 RNASE1P07998 156 aaKnown RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 OR4E1P0C645 316 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 SAA1P0DJI8 122 aaPredicted RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 KIR2DS2P43631 304 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 LPAR6P43657 344 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 TAS2R31P59538 309 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 RPS16P62249 146 aaKnown RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 PSG5Q15238 335 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 RGS21Q2M5E4 152 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 TRIM16LQ309B1 348 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 TMEM128Q5BJH2 165 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 PLET1Q6UQ28 207 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 SSX9Q7RTT3 188 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 FAM71E2Q8N5Q1 922 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 TCTEX1D1Q8N7M0 179 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 OR52B4Q8NGK2 314 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 LHFPL5Q8TAF8 219 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
MSH6-211ENST00000606499 CASTOR1Q8WTX7 329 aa6.12□□□□□ -1.43
MSH6-211ENST00000606499 GLYATL2Q8WU03 294 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms