RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236	RIMS4	Q9H426	269 aa	Predicted RBP	12.89	□□□□□ -0.35
FGFR2-222	ENST00000604236	WIPI2	Q9Y4P8	454 aa		12.89	□□□□□ -0.35
FGFR2-222	ENST00000604236	MARCH11	A6NNE9	402 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	C1QTNF9B	B2RNN3	333 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	PRR27	Q6MZM9	219 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	COQ2	Q96H96	371 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	TECTB	Q96PL2	329 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	PKD1L2	Q7Z442	2459 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	UCP1	P25874	307 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	FLI1	Q01543	452 aa	Predicted RBP	12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	CD177	Q8N6Q3	437 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	RCC1L	Q96I51	464 aa	Known RBP	12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	ZNF251	Q9BRH9	671 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	RRP8	O43159	456 aa	Known RBP	12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR7C2	O60412	319 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	CD33	P20138	364 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	ZNF585B	Q52M93	769 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	C19orf35	Q6ZS72	473 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	GPR61	Q9BZJ8	451 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	NDRG3	Q9UGV2	375 aa		12.88	□□□□□ -0.35
FGFR2-222	ENST00000604236	IGKV3D-15	A0A087WSY6	115 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	MGST1	P10620	155 aa	Known RBP	12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	RHOV	Q96L33	236 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	ELOVL1	Q9BW60	279 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	CXXC4	Q9H2H0	198 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	NAV2	Q8IVL1	2488 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	IGHV3OR16-8	A0A075B7F1	116 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	IGHV3-35	A0A0C4DH35	117 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236		H0Y980	276 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	LINC01387	J3KSC0	135 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	C10orf55	Q5SWW7	151 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	LPAR2	Q9HBW0	351 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	SELENOK	Q9Y6D0	94 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	HCFC1	P51610	2035 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	CXCL1	P09341	107 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	IL15RA	Q13261	267 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	PLGLA	Q15195	96 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	STUM	Q69YW2	141 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236		Q6P435	159 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	TMEM45B	Q96B21	275 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	DERL1	Q9BUN8	251 aa		12.87	□□□□□ -0.35
FGFR2-222	ENST00000604236	IFNL4	K9M1U5	179 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	PRRG2	O14669	202 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	MMP23A	O75900	390 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	TMEM11	P17152	192 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	MDH2	P40926	338 aa	Known RBP	12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	PAX9	P55771	341 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	LGALS4	P56470	323 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	IL24	Q13007	206 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	RNF212	Q495C1	297 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	HCP5	Q6MZN7	132 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	ACP7	Q6ZNF0	438 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	COLCA1	Q6ZS62	124 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	STARD4	Q96DR4	205 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	ACAN	P16112	2415 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	PGA5	P0DJD9	388 aa		12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	USF2	Q15853	346 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	MRPL37	Q9BZE1	423 aa	Known RBP	12.86	□□□□□ -0.35
FGFR2-222	ENST00000604236	TM4SF5	O14894	197 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR9G9	P0C7N8	305 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	CTRB1	P17538	263 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	TAS2R30	P59541	319 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	TNFRSF9	Q07011	255 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	NMS	Q5H8A3	153 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	CTRB2	Q6GPI1	263 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	RPS23	P62266	143 aa	Known RBP	12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	RAB24	Q969Q5	203 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	SPSB4	Q96A44	273 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	HSD17B10	Q99714	261 aa	Known RBP	12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	LINC00470	Q9BZP3	86 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	RRH	O14718	337 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	CA11	O75493	328 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	ASCL2	Q99929	193 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	IER2	Q9BTL4	223 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	PLEKHA3	Q9HB20	300 aa		12.85	□□□□□ -0.35
FGFR2-222	ENST00000604236	CELSR1	Q9NYQ6	3014 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	COLCA2	A8K830	154 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	NDUFB4	O95168	129 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	MRPS11	P82912	194 aa	Known RBP	12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	ID3	Q02535	119 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	HABP2	Q14520	560 aa	Predicted RBP	12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR10X1	Q8NGY0	326 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR5B12	Q96R08	314 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	PSMB3	P49720	205 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	CDPF1	Q6NVV7	123 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	WDR31	Q8NA23	367 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR10W1	Q8NGF6	305 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	TAF15	Q92804	592 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	RAB40C	Q96S21	281 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	HIPK2	Q9H2X6	1198 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236		A0A1B0GUS0	222 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	PRR33	A8MZF0	331 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236		H7BYZ3	331 aa		12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	GAPDH	P04406	335 aa	Known RBP	12.84	□□□□□ -0.35
FGFR2-222	ENST00000604236	OR5G3	P0C626	314 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms