RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 GGNQ86UU5 652 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 DCTN5Q9BTE1 182 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 C7orf69Q9H7B7 122 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 TECTAO75443 2155 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 EFNA2O43921 213 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 THBDP07204 575 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 WDR25Q64LD2 544 aaPredicted RBP9.37□□□□□ -0.91
ZNF558-207ENST00000601372 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
ZNF558-207ENST00000601372 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 A0A1W2PN81 502 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 DANCRP0C864 163 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 CRIM1Q9NZV1 1036 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 PTPRSQ13332 1948 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 IGSF23A1L1A6 192 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 RHBDL1O75783 438 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 RHOBP62745 196 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 C5orf63A6NC05 138 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 CLN5O75503 358 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 WISP1O95388 367 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 RND3P61587 244 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 ZNF788Q6ZQV5 615 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 SLC35E3Q7Z769 313 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 ZNF586Q9NXT0 402 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 PTGDSP41222 190 aa9.37□□□□□ -0.91
ZNF558-207ENST00000601372 MRPL30Q8TCC3 161 aaKnown RBP9.37□□□□□ -0.91
ZNF558-207ENST00000601372 SPTBN2O15020 2390 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
ZNF558-207ENST00000601372 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 WDR31Q8NA23 367 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 OR2T10Q8NGZ9 312 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 IGKV1D-8A0A087WSZ0 117 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 BCL2P10415 239 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 OR10A7Q8NGE5 316 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 VSTM2AQ8TAG5 236 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 TM2D1Q9BX74 207 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 MRPL37Q9BZE1 423 aaKnown RBP9.36□□□□□ -0.91
ZNF558-207ENST00000601372 SDK2Q58EX2 2172 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 C17orf100A8MU93 164 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 WNT9BO14905 357 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 ETFRF1Q6IPR1 90 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 PNKDQ8N490 385 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 IDI2-AS1Q9NZ38 188 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 CEP192Q8TEP8 1941 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 NPIPB13A6NJU9 1138 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 NPIPB4C9JG80 1138 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 RAB29O14966 203 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 SRSF10O75494 262 aaKnown RBP9.36□□□□□ -0.91
ZNF558-207ENST00000601372 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
ZNF558-207ENST00000601372 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
ZNF558-207ENST00000601372 MRPL13Q9BYD1 178 aaKnown RBP9.36□□□□□ -0.91
ZNF558-207ENST00000601372 C20orf202A1L168 122 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 PROB1E7EW31 1015 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 ABHD12Q8N2K0 398 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 OR5R1Q8NH85 324 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 ANAPC16Q96DE5 110 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 PLSCR4Q9NRQ2 329 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 DUXBA0A1W2PPF3 345 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 MS4A10Q96PG2 267 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 DPPA3Q6W0C5 159 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 GCSAMQ8N6F7 178 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 OR5P3Q8WZ94 311 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 CENPVQ7Z7K6 275 aaPredicted RBP9.35□□□□□ -0.91
ZNF558-207ENST00000601372 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 LOC390937A0A1W2PQ73 354 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 S1PR2O95136 353 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 TFF1P04155 84 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 KIR2DL2P43627 348 aaPredicted RBP9.35□□□□□ -0.91
ZNF558-207ENST00000601372 PLAURQ03405 335 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 FGFBP3Q8TAT2 258 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 PKIBQ9C010 78 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 ZNF716A6NP11 495 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 B4DEV8 164 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 HTR1DP28221 377 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 WNT5AP41221 380 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 IQCJQ1A5X6 159 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 ZNRF1Q8ND25 227 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
ZNF558-207ENST00000601372 H0YIZ8 118 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 PF4V1P10720 104 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 FAM216AQ8WUB2 273 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 RHOVQ96L33 236 aa9.34□□□□□ -0.91
ZNF558-207ENST00000601372 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms