RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 C9JQL5 133 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 TIMM8AO60220 97 aaPredicted RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 COX6A1P12074 109 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 EDN2P20800 178 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 SNCAP37840 140 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 DYNLT3P51808 116 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 RNPS1Q15287 305 aaKnown RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 WDR25Q64LD2 544 aaPredicted RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 PMS2CLQ68D20 193 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 MOB1BQ7L9L4 216 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 MRPL52Q86TS9 123 aaKnown RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 IL22RA2Q969J5 263 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 GNG12Q9UBI6 72 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 MPC1Q9Y5U8 109 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 CACNA1EQ15878 2313 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 TRBV6-7A0A0A0MS04 114 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 TRAV39A0A0B4J263 110 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 F8WDY8 70 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 ZIC3O60481 467 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 KLK2P20151 261 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 CA6P23280 308 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 LCN2P80188 198 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 CLEC12BQ2HXU8 276 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 OR2M7Q8NG81 312 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 SRXN1Q9BYN0 137 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 BARX1Q9HBU1 254 aaPredicted RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
LIG1-220ENST00000601091 IGHV2OR16-5A0A0B4J2B6 119 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 NPIPB5A8MRT5 1133 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 PATE3B3GLJ2 98 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 C17orf112F2Z3M2 114 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 OR2J3O76001 311 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 TMEM187Q14656 261 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 OR5A2Q8NGI9 324 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 SMIM8Q96KF7 97 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 SCNM1Q9BWG6 230 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 TMEM160Q9NX00 188 aa8.91□□□□□ -0.98
LIG1-220ENST00000601091 OR11H12B2RN74 326 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 IL18BPO95998 194 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 MDKP21741 143 aaPredicted RBP8.9□□□□□ -0.98
LIG1-220ENST00000601091 AMMECR1LQ6DCA0 310 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 MRPL14Q6P1L8 145 aaKnown RBP8.9□□□□□ -0.98
LIG1-220ENST00000601091 H2BFWTQ7Z2G1 175 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 Q8IYB0 196 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 OR11H1Q8NG94 326 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 OR10V1Q8NGI7 309 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 OR11H2Q8NH07 326 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 CT55Q8WUE5 264 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 CHRDL1Q9BU40 450 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 MCRIP2Q9BUT9 160 aaKnown RBP8.9□□□□□ -0.98
LIG1-220ENST00000601091 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 CACNG5Q9UF02 275 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 SIGLEC15Q6ZMC9 328 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 LHFPL1Q86WI0 220 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 ZNF808Q8N4W9 903 aaPredicted RBP8.9□□□□□ -0.98
LIG1-220ENST00000601091 TMEM252Q8N6L7 170 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 UBALD1Q8TB05 177 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 PTH2Q96A98 100 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 LYZL4Q96KX0 146 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 TMEM222Q9H0R3 208 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 CACFD1Q9UGQ2 172 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 KIAA1549LQ6ZVL6 1849 aa8.9□□□□□ -0.98
LIG1-220ENST00000601091 DANCRP0C864 163 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 PGA5P0DJD9 388 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 CSRP1P21291 193 aaKnown RBP8.9□□□□□ -0.99
LIG1-220ENST00000601091 FAM71F2Q6NXP2 309 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 OR10P1Q8NGE3 313 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 MAFAQ8NHW3 353 aaPredicted RBP8.9□□□□□ -0.99
LIG1-220ENST00000601091 BLNKQ8WV28 456 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.99
LIG1-220ENST00000601091 MS4A10Q96PG2 267 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 TAAR6Q96RI8 345 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 GINS3Q9BRX5 216 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 CABLES2Q9BTV7 478 aa8.9□□□□□ -0.99
LIG1-220ENST00000601091 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 SLC22A20A6NK97 555 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 HMGB3O15347 200 aaKnown RBP8.89□□□□□ -0.99
LIG1-220ENST00000601091 SPINT2O43291 252 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 GATA3P23771 443 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 SUPT4H1P63272 117 aaKnown RBP8.89□□□□□ -0.99
LIG1-220ENST00000601091 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
LIG1-220ENST00000601091 IMMP1LQ96LU5 166 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 C1orf43Q9BWL3 253 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 GAGE10A6NGK3 116 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 PAX1P15863 534 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 FGF12P61328 243 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 GALMQ96C23 342 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 GFRA1P56159 465 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 HIST1H1AQ02539 215 aaPredicted RBP8.89□□□□□ -0.99
LIG1-220ENST00000601091 ZNF154Q13106 437 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 FRZBQ92765 325 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 ATP5SQ99766 215 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 SMIM7Q9BQ49 75 aa8.89□□□□□ -0.99
LIG1-220ENST00000601091 JKAMPQ9P055 326 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms