RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 INMT-MINDY4F8WBC2 141 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 H0Y980 276 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 CRYZL1O95825 349 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 IGHV4-59P01825 116 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 FAM106CPP0CH98 169 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 RRASP10301 218 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 VAMP1P23763 118 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 IER3P46695 156 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 UBE2MP61081 183 aaKnown RBP16.41■□□□□ 0.22
PNKP-215ENST00000600910 OXA1LQ15070 435 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 ALX4Q9H161 411 aaPredicted RBP16.41■□□□□ 0.22
PNKP-215ENST00000600910 KCNIP3Q9Y2W7 256 aa16.41■□□□□ 0.22
PNKP-215ENST00000600910 FAM157CP0CG43 387 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 CBX3Q13185 183 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 HNF4GQ14541 408 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 C4orf46Q504U0 113 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 ZNF585BQ52M93 769 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 THNSL2Q86YJ6 484 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 OR4S2Q8NH73 311 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 CD300LFQ8TDQ1 290 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 FLYWCH2Q96CP2 140 aaKnown RBP16.4■□□□□ 0.22
PNKP-215ENST00000600910 GALNT14Q96FL9 552 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 CUBNO60494 3623 aa16.4■□□□□ 0.22
PNKP-215ENST00000600910 RBFOX2O43251 390 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■■□ 23.3
PNKP-215ENST00000600910 HOXA3O43365 443 aaPredicted RBP16.39■□□□□ 0.21
PNKP-215ENST00000600910 MOSP00540 346 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 HLA-AP01891 365 aaKnown RBP16.39■□□□□ 0.21
PNKP-215ENST00000600910 RAG2P55895 527 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 EBI3Q14213 229 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 SLC9A3R2Q15599 337 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 DHRS7BQ6IAN0 325 aaPredicted RBP16.39■□□□□ 0.21
PNKP-215ENST00000600910 C11orf88Q6PI97 169 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 RBMS3Q6XE24 437 aaKnown RBP16.39■□□□□ 0.21
PNKP-215ENST00000600910 OR4C13Q8NGP0 309 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 CHPT1Q8WUD6 406 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 EAF1Q96JC9 268 aaPredicted RBP16.39■□□□□ 0.21
PNKP-215ENST00000600910 RITA1Q96K30 269 aa16.39■□□□□ 0.21
PNKP-215ENST00000600910 C9orf170A2RU37 121 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 B3GALNT1O75752 331 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 SFT2D2O95562 160 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 IFNA2P01563 188 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 DHRS2Q13268 280 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 LY6EQ16553 131 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 GLYATL2Q8WU03 294 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 SSMEM1Q8WWF3 244 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 TMEM222Q9H0R3 208 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 FAM212BQ9NTI7 297 aaPredicted RBP16.38■□□□□ 0.21
PNKP-215ENST00000600910 PRR13Q9NZ81 148 aa16.38■□□□□ 0.21
PNKP-215ENST00000600910 TEP1Q99973 2627 aaKnown RBP16.38■□□□□ 0.21
PNKP-215ENST00000600910 S1PR2O95136 353 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 SERPINE2P07093 398 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 ANXA3P12429 323 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 TMEM11P17152 192 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 UCP1P25874 307 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 LPAR6P43657 344 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 TMEM177Q53S58 311 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 LYG2Q86SG7 212 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 OR52B4Q8NGK2 314 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 TNFRSF19Q9NS68 423 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 TCF19Q9Y242 345 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 BTBD17A6NE02 478 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 SHOXO15266 292 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 HPRT1P00492 218 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 RPS16P62249 146 aaKnown RBP16.37■□□□□ 0.21
PNKP-215ENST00000600910 TMEM187Q14656 261 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 MINDY2Q8NBR6 621 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 OR5R1Q8NH85 324 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 OSR1Q8TAX0 266 aaPredicted RBP16.37■□□□□ 0.21
PNKP-215ENST00000600910 CASTOR1Q8WTX7 329 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 HARBI1Q96MB7 349 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 SEC22CQ9BRL7 303 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 PLEKHA2Q9HB19 425 aa16.37■□□□□ 0.21
PNKP-215ENST00000600910 DHFRP00374 187 aa16.36■□□□□ 0.21
PNKP-215ENST00000600910 TMEM219Q86XT9 240 aa16.36■□□□□ 0.21
PNKP-215ENST00000600910 Q8N6K4 173 aa16.36■□□□□ 0.21
PNKP-215ENST00000600910 ZNF418Q8TF45 676 aaPredicted RBP16.36■□□□□ 0.21
PNKP-215ENST00000600910 A6NDX4 124 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 IGKV1-39P01597 117 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 IGKV1D-39P04432 117 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 IL5P05113 134 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 CNTFRP26992 372 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 DUX5Q96PT3 197 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 RNF5Q99942 180 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 PITPNC1Q9UKF7 332 aa16.35■□□□□ 0.21
PNKP-215ENST00000600910 SRRM4A7MD48 611 aaKnown RBP16.34■□□□□ 0.21
PNKP-215ENST00000600910 PRAF2O60831 178 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 CDS2O95674 445 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 RPA2P15927 270 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 F2RL1P55085 397 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 MMDQ15546 238 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 ANKRD55Q3KP44 614 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 LIAT1Q6ZQX7 453 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 VKORC1L1Q8N0U8 176 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 COMMD9Q9P000 198 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 VPREB3Q9UKI3 123 aa16.34■□□□□ 0.21
PNKP-215ENST00000600910 POMT1Q9Y6A1 747 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms