RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 KITLGP21583 273 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 ZNF709Q8N972 641 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 LRRC29Q8WV35 223 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 HSD17B10Q99714 261 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 DMRT1Q9Y5R6 373 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 TMEM250H0YL14 139 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 IFNL4K9M1U5 179 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 PROP1O75360 226 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 OR9G9P0C7N8 305 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 FABP4P15090 132 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 VWC2Q2TAL6 325 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 ZNF383Q8NA42 475 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 LAMP3Q9UQV4 416 aa16.84■□□□□ 0.29
SHKBP1-225ENST00000600733 ELOA3CA0A087WX78 387 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 C15orf62A8K5M9 175 aa16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 PAGE4O60829 102 aa16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 GCH1P30793 250 aa16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 OR10A7Q8NGE5 316 aa16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 R3HDM4Q96D70 268 aa16.83■□□□□ 0.28
SHKBP1-225ENST00000600733 SPINT2O43291 252 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 IGHV3-13P01766 116 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 IGHV3-7P01780 117 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 PFN1P07737 140 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 EGR1P18146 543 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 TUBG1P23258 451 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 ZNF718Q3SXZ3 478 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 GCSAMLQ5JQS6 135 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 SSX9Q7RTT3 188 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 TCTEX1D1Q8N7M0 179 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 ELOVL1Q9BW60 279 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 FAM234AQ9H0X4 552 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 MANBALQ9NQG1 85 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 IGHV2OR16-5A0A0B4J2B6 119 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 ZNF891A8MT65 544 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 PRDX2P32119 198 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 CLEC12BQ2HXU8 276 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 C9orf152Q5JTZ5 239 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 OR4X1Q8NH49 305 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 GAB2Q9UQC2 676 aa16.82■□□□□ 0.28
SHKBP1-225ENST00000600733 IGHV1-18A0A0C4DH31 117 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 TGOLN2O43493 480 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 FCGR3BO75015 233 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 BMP5P22003 454 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 GNB2P62879 340 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 Q8N7P7 452 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 OR2Z1Q8NG97 314 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 CADP27708 2225 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 GZMHP20718 246 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 DUTP33316 252 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 GPR12P47775 334 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 TRIP6Q15654 476 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 VKORC1L1Q8N0U8 176 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 C1orf162Q8NEQ5 155 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 OR51G1Q8NGK1 321 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 OPN3Q9H1Y3 402 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 WASF3Q9UPY6 502 aa16.81■□□□□ 0.28
SHKBP1-225ENST00000600733 H7BYZ3 331 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 GALR1P47211 349 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 HTD2P86397 168 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 ALKBH2Q6NS38 261 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 OR6C3Q9NZP0 311 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 GNG12Q9UBI6 72 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 IGKV1D-17A0A075B6S4 117 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 IGLV1-44P01699 117 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 ADH4P08319 380 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 CDC34P49427 236 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 Q8TCH9 128 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 SRD5A3Q9H8P0 318 aa16.8■□□□□ 0.28
SHKBP1-225ENST00000600733 TRAV38-1A0A0B4J264 116 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 C17orf112F2Z3M2 114 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 AQP7O14520 342 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 NPPCP23582 126 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 MSMPQ1L6U9 139 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 MBNL2Q5VZF2 373 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 IGHV3OR15-7A0A075B7D8 119 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 PRR33A8MZF0 331 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 GYPAP02724 150 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 WT1P19544 449 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 CD1BP29016 333 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 RPL39P5Q59GN2 51 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 LRP11Q86VZ4 500 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 PYGO2Q9BRQ0 406 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 PRDM13Q9H4Q3 707 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 DUSP13Q9UII6 198 aa16.79■□□□□ 0.28
SHKBP1-225ENST00000600733 TET2Q6N021 2002 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 C11orf94C9JXX5 98 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 EDDM3BP56851 147 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 MORN2Q502X0 79 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 SPRNQ5BIV9 151 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 PRAMEF5Q5TYX0 476 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 OR5T1Q8NG75 326 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 NEIL1Q96FI4 390 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 HIST1H2BLQ99880 126 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 LAMA5O15230 3695 aa16.78■□□□□ 0.28
SHKBP1-225ENST00000600733 SMCO3A2RU48 225 aa16.77■□□□□ 0.28
SHKBP1-225ENST00000600733 M0R1X1 148 aa16.77■□□□□ 0.28
SHKBP1-225ENST00000600733 CRYAAP02489 173 aa16.77■□□□□ 0.28
SHKBP1-225ENST00000600733 ACOT6Q3I5F7 207 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-225ENST00000600733 PACRGQ96M98 296 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-225ENST00000600733 OR5B12Q96R08 314 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms