RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SNAI2O43623 268 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 HLA-DQA1P01909 254 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 APCSP02743 223 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 PSG7Q13046 419 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 DOLPP1Q86YN1 238 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 OR5D13Q8NGL4 314 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 HARBI1Q96MB7 349 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 YAE1D1Q9NRH1 226 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 TMEM140Q9NV12 185 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 CLCF1Q9UBD9 225 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 TIMM9Q9Y5J7 89 aa8.33□□□□□ -1.08
NFKB1-212ENST00000600343 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 PPYP01298 95 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 MGST1P10620 155 aaKnown RBP8.32□□□□□ -1.08
NFKB1-212ENST00000600343 SLC23A3Q6PIS1 610 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 OVCA2Q8WZ82 227 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 GPR82Q96P67 336 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 ZNF257Q9Y2Q1 563 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 B3GALT2O43825 422 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 COX5AP20674 150 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 ATP5G2Q06055 141 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 LHFPL2Q6ZUX7 228 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 RLN3Q8WXF3 142 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 PRRC2BQ5JSZ5 2229 aaKnown RBP8.32□□□□□ -1.08
NFKB1-212ENST00000600343 KIAA1549LQ6ZVL6 1849 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 IGKV1-9A0A0C4DH69 117 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 NEURL1O76050 574 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 AMY1AP04745 511 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 SLC38A11Q08AI6 406 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 DHRS13Q6UX07 377 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 TPRX1Q8N7U7 411 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 TMEM74BQ9NUR3 256 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
NFKB1-212ENST00000600343 TDRD6O60522 2096 aaKnown RBP8.32□□□□□ -1.08
NFKB1-212ENST00000600343 COL4A5P29400 1685 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 DEFA4P12838 97 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 REG1BP48304 166 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 CX3CL1P78423 397 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 VGLL4Q14135 290 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPANXN5Q5MJ07 72 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 C2orf91Q6ZV80 131 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPXQ9BT56 116 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 TXNIPQ9H3M7 391 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 RALYQ9UKM9 306 aaKnown RBP8.31□□□□□ -1.08
NFKB1-212ENST00000600343 TRPM6Q9BX84 2022 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 HELTA6NFD8 242 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SYNGR2O43760 224 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 DXOO77932 396 aaKnown RBP8.31□□□□□ -1.08
NFKB1-212ENST00000600343 ATXN8OSP0DMR3 200 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 DPTQ07507 201 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 DOK3Q7L591 496 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 TMEFF1Q8IYR6 380 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 OR52E5Q8NH55 327 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 C5orf30Q96GV9 206 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 CHRNA10Q9GZZ6 450 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 B4GALT7Q9UBV7 327 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SHANK1Q9Y566 2161 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPAG17Q6Q759 2223 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 KBTBD11-OT1A0A1B0GTJ5 212 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 H3BMH7 237 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 FCGR2AP12318 317 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 PEBP1P30086 187 aaKnown RBP8.31□□□□□ -1.08
NFKB1-212ENST00000600343 TCL1AP56279 114 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SHISA6Q6ZSJ9 500 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 OR8B12Q8NGG6 310 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 OR10X1Q8NGY0 326 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 OR10D3Q8NH80 312 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
NFKB1-212ENST00000600343 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 MS4A6AQ9H2W1 248 aa8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
NFKB1-212ENST00000600343 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 SYS1-DBNDD2H3BUS1 97 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 K7EN84 100 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 IZUMO4Q1ZYL8 232 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 WDR5BQ86VZ2 330 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 TRAV38-1A0A0B4J264 116 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 A0A0G2JRQ6 117 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 HMGA1P17096 107 aaKnown RBP8.3□□□□□ -1.08
NFKB1-212ENST00000600343 FOXE3Q13461 319 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 C8orf86Q6ZUL3 223 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 SHISA5Q8N114 240 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 RDH5Q92781 318 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 Q96M66 194 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
NFKB1-212ENST00000600343 LSM7Q9UK45 103 aaKnown RBP8.3□□□□□ -1.08
NFKB1-212ENST00000600343 V9GYV3 84 aa8.3□□□□□ -1.08
NFKB1-212ENST00000600343 DAP3P51398 398 aaKnown RBP8.29□□□□□ -1.08
NFKB1-212ENST00000600343 Q6ZNB5 142 aa8.29□□□□□ -1.08
NFKB1-212ENST00000600343 ZDHHC23Q8IYP9 409 aa8.29□□□□□ -1.08
NFKB1-212ENST00000600343 GAPTQ8N292 157 aa8.29□□□□□ -1.08
NFKB1-212ENST00000600343 HOXB13Q92826 284 aaPredicted RBP8.29□□□□□ -1.08
NFKB1-212ENST00000600343 MBD6Q96DN6 1003 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms