RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	FBXL15	Q9H469	300 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	KCNIP1	Q9NZI2	227 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	GAB2	Q9UQC2	676 aa		11.33	□□□□□ -0.6
IRF3-223	ENST00000599223	EPPK1	P58107	5090 aa	Known RBP	11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	TMEM272	A0A1B0GTI8	110 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	FCN1	O00602	326 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	XRCC3	O43542	346 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	SAP30	O75446	220 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	FRMD6-AS1	P0C7T7	363 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	CRIP2	P52943	208 aa	Predicted RBP	11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	UNC119	Q13432	240 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	LY6G6F	Q5SQ64	297 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	CASC10	Q5T4H9	136 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	LIN54	Q6MZP7	749 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	MZT2B	Q6NZ67	158 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	HAPLN4	Q86UW8	402 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	ZNF429	Q86V71	674 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	OR2AK2	Q8NG84	335 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	MUC7	Q8TAX7	377 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	IL1F10	Q8WWZ1	152 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	SLC25A38	Q96DW6	304 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	URM1	Q9BTM9	101 aa	Known RBP	11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	FAAP24	Q9BTP7	215 aa		11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	GAR1	Q9NY12	217 aa	Known RBP	11.32	□□□□□ -0.6
IRF3-223	ENST00000599223	FOXA2	Q9Y261	457 aa	Predicted RBP	11.32	□□□□□ -0.6
IRF3-223	ENST00000599223		A0A0A6YYD4	124 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223		H0YJW9	148 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CTDSPL	O15194	276 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	PTTG1	O95997	202 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	NAPSA	O96009	420 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	LGALS1	P09382	135 aa	Known RBP	11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CT45A6	P0DMU7	189 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CT45A5	P0DMU8	189 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CT45A7	P0DMV0	189 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	AP3S2	P59780	193 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CX3CL1	P78423	397 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	ZNF57	Q68EA5	555 aa	Predicted RBP	11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	SNX29P2	Q8IUI4	249 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	FCAMR	Q8WWV6	532 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	GALM	Q96C23	342 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	FAM103A1	Q9BTL3	118 aa	Known RBP	11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	KIAA1456	Q9P272	454 aa		11.31	□□□□□ -0.6
IRF3-223	ENST00000599223	CENPX	A8MT69	81 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	LINC01619	G3V211	115 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	RRH	O14718	337 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	RGS11	O94810	467 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	IGHV3-11	P01762	117 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	GSTT2B	P0CG30	244 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	GP9	P14770	177 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	TAS2R20	P59543	309 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	RPS27A	P62979	156 aa	Known RBP	11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	FAM71F2	Q6NXP2	309 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	ZNF880	Q6PDB4	577 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	ABHD14B	Q96IU4	210 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	SDHC	Q99643	169 aa	Predicted RBP	11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	THAP7	Q9BT49	309 aa	Predicted RBP	11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	TMEM59	Q9BXS4	323 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	OR1A1	Q9P1Q5	309 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	SLC23A1	Q9UHI7	598 aa		11.3	□□□□□ -0.6
IRF3-223	ENST00000599223	TRAV18	A0A075B6X5	111 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	GABARAP	H6UMI1	98 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	GSTZ1	O43708	216 aa	Predicted RBP	11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	LINC00205	P59089	165 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	QRFP	P83859	136 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	ARL6IP1	Q15041	203 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	BAK1	Q16611	211 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	ACSM6	Q6P461	480 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	OR56B1	Q8NGI3	324 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	ABHD5	Q8WTS1	349 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	SMIM4	Q8WVI0	70 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	NEDD4L	Q96PU5	975 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	AGMAT	Q9BSE5	352 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	TM2D1	Q9BX74	207 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	NUBP2	Q9Y5Y2	271 aa		11.29	□□□□□ -0.6
IRF3-223	ENST00000599223	OR5H14	A6NHG9	310 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	TMEM14DP	A8MWL7	114 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	LDLRAD4	O15165	306 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	PROP1	O75360	226 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	HLA-DQB1	P01920	261 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	PRSS3	P35030	304 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	IFITM3	Q01628	133 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	ASAH1	Q13510	395 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	CENPS	Q8N2Z9	138 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	TOMM5	Q8N4H5	51 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	MS4A10	Q96PG2	267 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	ABHD1	Q96SE0	405 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	TAS2R8	Q9NYW2	309 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	PIPOX	Q9P0Z9	390 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	WASHC3	Q9Y3C0	194 aa		11.28	□□□□□ -0.6
IRF3-223	ENST00000599223	LINC00854	A0A1B0GVQ3	168 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	SULT1C2	O00338	296 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	RAB29	O14966	203 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	CA2	P00918	260 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	IGKV1-16	P04430	117 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	TPPP2	P59282	170 aa		11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	SSBP2	P81877	361 aa	Predicted RBP	11.27	□□□□□ -0.61
IRF3-223	ENST00000599223	PLGLA	Q15195	96 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms