RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 CAPSLQ8WWF8 208 aa17.6■□□□□ 0.41
LTBP4-224ENST00000599016 CFHR4Q92496 578 aa17.6■□□□□ 0.41
LTBP4-224ENST00000599016 GALNT14Q96FL9 552 aa17.6■□□□□ 0.41
LTBP4-224ENST00000599016 FAM212BQ9NTI7 297 aaPredicted RBP17.6■□□□□ 0.41
LTBP4-224ENST00000599016 VGLL3A8MV65 326 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 RBFOX2O43251 390 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■□□□ 12.7
LTBP4-224ENST00000599016 SFT2D2O95562 160 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 IFNA2P01563 188 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 IL5P05113 134 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 SERPINE2P07093 398 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 VSIG10L2P0DP72 767 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 DYNLT3P51808 116 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 PPP1R1AQ13522 171 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 DHRS7BQ6IAN0 325 aaPredicted RBP17.59■□□□□ 0.41
LTBP4-224ENST00000599016 OR4S2Q8NH73 311 aa17.59■□□□□ 0.41
LTBP4-224ENST00000599016 GPN1Q9HCN4 374 aaPredicted RBP17.59■□□□□ 0.41
LTBP4-224ENST00000599016 INAFM1C9JVW0 142 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 HLA-AP01891 365 aaKnown RBP17.58■□□□□ 0.4
LTBP4-224ENST00000599016 OR5AC1P0C628 307 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 FAM106CPP0CH98 169 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 SUPT4H1P63272 117 aaKnown RBP17.58■□□□□ 0.4
LTBP4-224ENST00000599016 SLC9A3R2Q15599 337 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 LYG2Q86SG7 212 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 THNSL2Q86YJ6 484 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 SPATA3Q8NHX4 192 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 TP53RKQ96S44 253 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 SSX3Q99909 188 aa17.58■□□□□ 0.4
LTBP4-224ENST00000599016 MDFIC2A0A1B0GVS7 189 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 C9orf170A2RU37 121 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 VENTXO95231 258 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 HPRT1P00492 218 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 SNRNP70P08621 437 aaKnown RBP17.57■□□□□ 0.4
LTBP4-224ENST00000599016 LPAR6P43657 344 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 HES1Q14469 280 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 SP6Q3SY56 376 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 OR4C13Q8NGP0 309 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 OR2T10Q8NGZ9 312 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 CASTOR1Q8WTX7 329 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 FLYWCH2Q96CP2 140 aaKnown RBP17.57■□□□□ 0.4
LTBP4-224ENST00000599016 TMEM222Q9H0R3 208 aa17.57■□□□□ 0.4
LTBP4-224ENST00000599016 PIGBOS1A0A0B4J2F0 54 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 FAM90A9PA6NNJ1 464 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 CRYZL1O95825 349 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 MOSP00540 346 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 IGKV1D-33P01593 117 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 IGKV1-33P01594 117 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 RPA2P15927 270 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 UCP1P25874 307 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 RPS16P62249 146 aaKnown RBP17.56■□□□□ 0.4
LTBP4-224ENST00000599016 SRPXP78539 464 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 DHRS2Q13268 280 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 RBMS3Q6XE24 437 aaKnown RBP17.56■□□□□ 0.4
LTBP4-224ENST00000599016 PRDM13Q9H4Q3 707 aa17.56■□□□□ 0.4
LTBP4-224ENST00000599016 BTBD17A6NE02 478 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 RAMP3O60896 148 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 ATG12O94817 140 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 BRWD1-AS2P59051 145 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 TMEM187Q14656 261 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 TMEM177Q53S58 311 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 Q6YL49 198 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 LIAT1Q6ZQX7 453 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 OSR1Q8TAX0 266 aaPredicted RBP17.55■□□□□ 0.4
LTBP4-224ENST00000599016 ZNF431Q8TF32 576 aaPredicted RBP17.55■□□□□ 0.4
LTBP4-224ENST00000599016 GLYATL2Q8WU03 294 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 ZNF48Q96MX3 618 aaPredicted RBP17.55■□□□□ 0.4
LTBP4-224ENST00000599016 RNF5Q99942 180 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 SEC22CQ9BRL7 303 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 AIFM2Q9BRQ8 373 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 PLEKHA2Q9HB19 425 aa17.55■□□□□ 0.4
LTBP4-224ENST00000599016 H3BUX3 64 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 SHOXO15266 292 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 DUS4LO95620 317 aaKnown RBP17.54■□□□□ 0.4
LTBP4-224ENST00000599016 HRASP01112 189 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 TMEM11P17152 192 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 CD24P25063 80 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 EBI3Q14213 229 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 ZNF585BQ52M93 769 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 ZNF695Q8IW36 515 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 LGI3Q8N145 548 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 SIGLECL1Q8N7X8 197 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 OR52B4Q8NGK2 314 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 OR5R1Q8NH85 324 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 COQ8AQ8NI60 647 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 EAF1Q96JC9 268 aaPredicted RBP17.54■□□□□ 0.4
LTBP4-224ENST00000599016 COMMD9Q9P000 198 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 PITPNC1Q9UKF7 332 aa17.54■□□□□ 0.4
LTBP4-224ENST00000599016 SNRPGP15A8MWD9 76 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 CREBL2O60519 120 aaPredicted RBP17.53■□□□□ 0.4
LTBP4-224ENST00000599016 S1PR2O95136 353 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 IGKV1-16P04430 117 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 IER3P46695 156 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 LGALS7P47929 136 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 TATDN3Q17R31 274 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 SSMEM1Q8WWF3 244 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 HARBI1Q96MB7 349 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 TSNAXQ99598 290 aaKnown RBP17.53■□□□□ 0.4
LTBP4-224ENST00000599016 PHB2Q99623 299 aa17.53■□□□□ 0.4
LTBP4-224ENST00000599016 CDS2O95674 445 aa17.52■□□□□ 0.4
LTBP4-224ENST00000599016 NQO2P16083 231 aa17.52■□□□□ 0.4
LTBP4-224ENST00000599016 ERVK-16P61578 105 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms