RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NUP50Q9UKX7 468 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 FAM96BQ9Y3D0 163 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 HILPDAQ9Y5L2 63 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 C3orf85A0A1B0GTC6 90 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 H0Y980 276 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 OR4E1P0C645 316 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 F2RP25116 425 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 DUTP33316 252 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 RAB13P51153 203 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 TAGLNQ01995 201 aaKnown RBP9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 PPP1R1AQ13522 171 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 SLC9A3R2Q15599 337 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 SSX2Q16385 188 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 TATDN3Q17R31 274 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 RTL8BQ17RB0 113 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 OR2B11Q5JQS5 317 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 KLF17Q5JT82 389 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 LYG2Q86SG7 212 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 MOB3BQ86TA1 216 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 OR8H3Q8N146 312 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 TCTEX1D1Q8N7M0 179 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 CD300LFQ8TDQ1 290 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 CASTOR1Q8WTX7 329 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 CAPSLQ8WWF8 208 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 GPHA2Q96T91 129 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 ALX4Q9H161 411 aaPredicted RBP9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 DNAH9Q9NYC9 4486 aa9.71□□□□□ -0.86
SHKBP1-213ENST00000597325 PIGBOS1A0A0B4J2F0 54 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 H7C2Y5 167 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 SFT2D2O95562 160 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 FSHBP01225 129 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 IL5P05113 134 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 SERPINE2P07093 398 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 FBP1P09467 338 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 OR5AC1P0C628 307 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 CT45A6P0DMU7 189 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 CT45A5P0DMU8 189 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 CT45A7P0DMV0 189 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 VSIG10L2P0DP72 767 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 RRASP10301 218 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 SRPXP78539 464 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 DHODHQ02127 395 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 DHRS2Q13268 280 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 EIF4EBP1Q13541 118 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 GLDNQ6ZMI3 551 aaPredicted RBP9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 OR4S2Q8NH73 311 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 NABP2Q9BQ15 211 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 SEC22CQ9BRL7 303 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 SLC35D1Q9NTN3 355 aa9.7□□□□□ -0.86
SHKBP1-213ENST00000597325 LYSTQ99698 3801 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 A0A0U1RQK1 487 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 A0A1W2PPI3 338 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 LINC00473A8K010 186 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 TIMM23O14925 209 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 FCGR3BO75015 233 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 PROP1O75360 226 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 BRS3P32247 399 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 MC5RP33032 325 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 RPL30P62888 115 aaKnown RBP9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 SP6Q3SY56 376 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 DHRS7BQ6IAN0 325 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 PDPNQ86YL7 162 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 C1QL4Q86Z23 238 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 SPAG16Q8N0X2 631 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 ZNF431Q8TF32 576 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 GALNT14Q96FL9 552 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 TP53RKQ96S44 253 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 PHB2Q99623 299 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 ALG5Q9Y673 324 aa9.69□□□□□ -0.86
SHKBP1-213ENST00000597325 SNRPGP15A8MWD9 76 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 H0YJW9 148 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 RBFOX2O43251 390 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 ATG12O94817 140 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 DUS4LO95620 317 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 SUPT4H1P63272 117 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 LDLRAD2Q5SZI1 272 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 LGI3Q8N145 548 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 OR5AN1Q8NGI8 311 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 OR52B4Q8NGK2 314 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 C17orf50Q8WW18 174 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 DDB2Q92466 427 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 TMEM222Q9H0R3 208 aa9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 FAM212BQ9NTI7 297 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-213ENST00000597325 IGHV3-72A0A0B4J1Y9 119 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 C7orf66A4D0T2 115 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 SSNA1O43805 119 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 CRYZL1O95825 349 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 RPA2P15927 270 aa9.67□□□□□ -0.86
SHKBP1-213ENST00000597325 UCP1P25874 307 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms