RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PPP1R27Q86WC6 154 aa16.47■□□□□ 0.23
PNKP-209ENST00000596726 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
PNKP-209ENST00000596726 IFT46Q9NQC8 304 aa16.47■□□□□ 0.23
PNKP-209ENST00000596726 TNCP24821 2201 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 NUDT19A8MXV4 375 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 SHOXO15266 292 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 CD33P20138 364 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 SSBP2P81877 361 aaPredicted RBP16.46■□□□□ 0.23
PNKP-209ENST00000596726 CDK10Q15131 360 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 MSMO1Q15800 293 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 MZT2AQ6P582 158 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 OVCH2Q7RTZ1 564 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 LINC00482Q8N8I6 264 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 GIMAP1Q8WWP7 306 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 KLK15Q9H2R5 256 aa16.46■□□□□ 0.23
PNKP-209ENST00000596726 SMIM31A0A1B0GVY4 71 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 WIPF1O43516 503 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 CRYZL1O95825 349 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 PPYP01298 95 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 MYCNOSP40205 109 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 MRGPRG-AS1Q2M3A8 158 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 OXLD1Q5BKU9 147 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 MRPL41Q8IXM3 137 aaKnown RBP16.45■□□□□ 0.22
PNKP-209ENST00000596726 TCTEX1D1Q8N7M0 179 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 OSR1Q8TAX0 266 aaPredicted RBP16.45■□□□□ 0.22
PNKP-209ENST00000596726 GPX8Q8TED1 209 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 AP3S1Q92572 193 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 P2RX4Q99571 388 aa16.45■□□□□ 0.22
PNKP-209ENST00000596726 HSD17B10Q99714 261 aaKnown RBP16.45■□□□□ 0.22
PNKP-209ENST00000596726 ARPC1BO15143 372 aaKnown RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 SOX15O60248 233 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 TMEM267Q0VDI3 215 aaPredicted RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 PJVKQ0ZLH3 352 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 SPCS2Q15005 226 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 ECSCRQ19T08 205 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 AKIRIN2Q53H80 203 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 KCTD9Q7L273 389 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 CLVS1Q8IUQ0 354 aaPredicted RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 SECTM1Q8WVN6 248 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 FAM103A1Q9BTL3 118 aaKnown RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 CCL28Q9NRJ3 127 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 FOXA2Q9Y261 457 aaPredicted RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 MRPS7Q9Y2R9 242 aaKnown RBP16.44■□□□□ 0.22
PNKP-209ENST00000596726 PRELID3BQ9Y3B1 194 aa16.44■□□□□ 0.22
PNKP-209ENST00000596726 FCGR3BO75015 233 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 RPL5P46777 297 aaKnown RBP16.43■□□□□ 0.22
PNKP-209ENST00000596726 BRWD1-AS2P59051 145 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 UBE2KP61086 200 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 DYRK1AQ13627 763 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 FXYD3Q14802 87 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 DHRS11Q6UWP2 260 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 ZNF66Q6ZN08 573 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 LYSMD2Q8IV50 215 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 MFSD4AQ8N468 514 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 ZNF491Q8N8L2 437 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 ARPC1AQ92747 370 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 RAX2Q96IS3 184 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 BCL7BQ9BQE9 202 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 SCPEP1Q9HB40 452 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 DNAH3Q8TD57 4116 aa16.43■□□□□ 0.22
PNKP-209ENST00000596726 A0A1W2PN81 502 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 IGLL1P15814 213 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 CHRNA7P36544 502 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 RFX2P48378 723 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 RAB9AP51151 201 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 TMBIM6P55061 237 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 VMA21Q3ZAQ7 101 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 TMEM65Q6PI78 240 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 UNQ5815/PRO19632Q6UWF5 114 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 ZBTB34Q8NCN2 500 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 LFNGQ8NES3 379 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 ABHD5Q8WTS1 349 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 RAB2BQ8WUD1 216 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 C4orf3Q8WVX3 66 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 UBE2E2Q96LR5 201 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 SLC5A7Q9GZV3 580 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 EHFQ9NZC4 300 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 ADAM30Q9UKF2 790 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 A3GALT2U3KPV4 340 aa16.42■□□□□ 0.22
PNKP-209ENST00000596726 CCL24O00175 119 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 SULT1C2O00338 296 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 PMP2P02689 132 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 TAS2R46P59540 309 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 SNX29P2Q8IUI4 249 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 OR5M8Q8NGP6 311 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 TCTEX1D2Q8WW35 142 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 RCC1LQ96I51 464 aaKnown RBP16.41■□□□□ 0.22
PNKP-209ENST00000596726 DUX3Q96PT4 197 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 GPHA2Q96T91 129 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 TAS2R8Q9NYW2 309 aa16.41■□□□□ 0.22
PNKP-209ENST00000596726 FAM25AB3EWG3 89 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 FAM25CB3EWG5 89 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 FAM25GB3EWG6 89 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 FXYD4P59646 89 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 RUNX1Q01196 453 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 DEFB136Q30KP8 78 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 PDLIM3Q53GG5 364 aaPredicted RBP16.4■□□□□ 0.22
PNKP-209ENST00000596726 ACTBL2Q562R1 376 aa16.4■□□□□ 0.22
PNKP-209ENST00000596726 OR2B11Q5JQS5 317 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms