RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KIR2DS2P43631 304 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 PRSS8Q16651 343 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 AHSA2Q719I0 299 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 FAM223AQ8IWN6 122 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 MS4A15Q8N5U1 240 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 TEX45Q8NA69 505 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 SETD9Q8NE22 299 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 DYNLRB2Q8TF09 96 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 CYGBQ8WWM9 190 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 SRSF12Q8WXF0 261 aaKnown RBP7.49□□□□□ -1.21
LIG1-209ENST00000596104 ARHGAP5-AS1Q96IT6 56 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 PHB2Q99623 299 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 GFI1Q99684 422 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 CMSS1Q9BQ75 279 aaKnown RBP7.49□□□□□ -1.21
LIG1-209ENST00000596104 URM1Q9BTM9 101 aaKnown RBP7.49□□□□□ -1.21
LIG1-209ENST00000596104 OR2D2Q9H210 308 aa7.49□□□□□ -1.21
LIG1-209ENST00000596104 UCHL1P09936 223 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 FOLR2P14207 255 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 SERPINB10P48595 397 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 UBE2KP61086 200 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
LIG1-209ENST00000596104 ATP5G2Q06055 141 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 P2RY14Q15391 338 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 TNXAQ16473 311 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 RTL8BQ17RB0 113 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 HSD17B12Q53GQ0 312 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 IGSF11Q5DX21 431 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 PLAC9Q5JTB6 97 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 IDO2Q6ZQW0 420 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 OR4A4PQ8NGN8 299 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 FBLIM1Q8WUP2 373 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 DDB2Q92466 427 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 WDR89Q96FK6 387 aaPredicted RBP7.48□□□□□ -1.21
LIG1-209ENST00000596104 OVOL2Q9BRP0 275 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 CABLES2Q9BTV7 478 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 PECRQ9BY49 303 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 PLCXD1Q9NUJ7 323 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 FKBP14Q9NWM8 211 aa7.48□□□□□ -1.21
LIG1-209ENST00000596104 TRBV6-7A0A0A0MS04 114 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 LGALS9O00182 355 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 SLC17A2O00624 439 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 FABP7O15540 132 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 LY6G6CO95867 125 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 GNAO1P09471 354 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 RRASP10301 218 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 CBX3Q13185 183 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 GUCA2BQ16661 112 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 C10orf55Q5SWW7 151 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 CEACAM19Q7Z692 300 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 DHRSXQ8N5I4 330 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 NECAP1Q8NC96 275 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 KCTD12Q96CX2 325 aaKnown RBP7.47□□□□□ -1.21
LIG1-209ENST00000596104 TECRQ9NZ01 308 aaKnown RBP7.47□□□□□ -1.21
LIG1-209ENST00000596104 KCNK7Q9Y2U2 307 aa7.47□□□□□ -1.21
LIG1-209ENST00000596104 LINC00473A8K010 186 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 PPP5D1E7EU14 171 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 BET1O15155 118 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 MPPED1O15442 326 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 TUSC2O75896 110 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 OR2J3O76001 311 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 OR2C1O95371 312 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 DIRAS3O95661 229 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 CRYZL1O95825 349 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 HLA-AP01891 365 aaKnown RBP7.46□□□□□ -1.22
LIG1-209ENST00000596104 GSTT2P0CG29 244 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 GSTT2BP0CG30 244 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
LIG1-209ENST00000596104 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.22
LIG1-209ENST00000596104 C15orf32Q32M92 178 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 TMEM61Q8N0U2 210 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 TTC9CQ8N5M4 171 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 BPIFB6Q8NFQ5 453 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 OSR1Q8TAX0 266 aaPredicted RBP7.46□□□□□ -1.22
LIG1-209ENST00000596104 CACNG8Q8WXS5 425 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 ACOT12Q8WYK0 555 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 SPIN2AQ99865 258 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 SPIN2BQ9BPZ2 258 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 ST6GALNAC5Q9BVH7 336 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 GGTLC1Q9BX51 225 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 ZNF430Q9H8G1 570 aaPredicted RBP7.46□□□□□ -1.22
LIG1-209ENST00000596104 PLGRKTQ9HBL7 147 aa7.46□□□□□ -1.22
LIG1-209ENST00000596104 LSM2Q9Y333 95 aaKnown RBP7.46□□□□□ -1.22
LIG1-209ENST00000596104 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 CXorf65A6NEN9 183 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 GGCTO75223 188 aaKnown RBP7.45□□□□□ -1.22
LIG1-209ENST00000596104 CDK1P06493 297 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 FCGR3AP08637 254 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 SAA1P0DJI8 122 aaPredicted RBP7.45□□□□□ -1.22
LIG1-209ENST00000596104 CBLN1P23435 193 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 CLDN12P56749 244 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 PLA2G7Q13093 441 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 TPBGQ13641 420 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 PMS2P11Q13670 270 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 CDK10Q15131 360 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 RAB11BQ15907 218 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 FAM209BQ5JX69 171 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 TMEM91Q6ZNR0 172 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 C19orf35Q6ZS72 473 aa7.45□□□□□ -1.22
LIG1-209ENST00000596104 SLC16A13Q7RTY0 426 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms