RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRTN3P24158 256 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 COX7A1P24310 79 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
VRK3-207ENST00000594092 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 DDB2Q92466 427 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 SIRT7Q9NRC8 400 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 KPTNQ9Y664 436 aa12.36□□□□□ -0.43
VRK3-207ENST00000594092 TOR1AO14656 332 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 KCNAB3O43448 404 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 BCL2L11O43521 198 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 IFNA7P01567 189 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 SLC25A16P16260 332 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 THBS3P49746 956 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 ZNF137PP52743 207 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 PRRX1P54821 245 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 SLC51BQ86UW2 128 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 PNKDQ8N490 385 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 ZNF383Q8NA42 475 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 ST6GALNAC6Q969X2 333 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 ADTRPQ96IZ2 230 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
VRK3-207ENST00000594092 PRELID3BQ9Y3B1 194 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 ABCA2Q9BZC7 2435 aa12.35□□□□□ -0.43
VRK3-207ENST00000594092 A0A0G2JRQ6 117 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 FCGR3BO75015 233 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 S1PR2O95136 353 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 CT45A6P0DMU7 189 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 CT45A5P0DMU8 189 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 CT45A7P0DMV0 189 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 KIR2DS2P43631 304 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 ZNF680Q8NEM1 530 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 OR13D1Q8NGV5 346 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 LPAR2Q9HBW0 351 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 MMP24Q9Y5R2 645 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
VRK3-207ENST00000594092 PVALBP20472 110 aaPredicted RBP12.34□□□□□ -0.43
VRK3-207ENST00000594092 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 HCP5Q6MZN7 132 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 FAM71F2Q6NXP2 309 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 ARPC5LQ9BPX5 153 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
VRK3-207ENST00000594092 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
VRK3-207ENST00000594092 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 WNK2Q9Y3S1 2297 aa12.34□□□□□ -0.43
VRK3-207ENST00000594092 MSGN1A6NI15 193 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 WRBO00258 174 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 RBFOX2O43251 390 aaKnown RBP eCLIP12.33□□□□□ -0.44
VRK3-207ENST00000594092 PITX3O75364 302 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 KRASP01116 189 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 HKR1P10072 659 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 IL3RAP26951 378 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 RPL12P30050 165 aaKnown RBP12.33□□□□□ -0.44
VRK3-207ENST00000594092 ID3Q02535 119 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 KLRD1Q13241 179 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
VRK3-207ENST00000594092 OR11H6Q8NGC7 330 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
VRK3-207ENST00000594092 MAP1AP78559 2803 aaPredicted RBP12.33□□□□□ -0.44
VRK3-207ENST00000594092 A0A096LNT2 108 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 HPRT1P00492 218 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 MMP9P14780 707 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 USF1P22415 310 aaPredicted RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 G6PCP35575 357 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 P2RY1P47900 373 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 REG1BP48304 166 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 DVL1P1P54792 670 aaPredicted RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
VRK3-207ENST00000594092 UBA52P62987 128 aaKnown RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 EXOSC2Q13868 293 aaKnown RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 NDUFA5Q16718 116 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 UBQLN2Q9UHD9 624 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 SSSCA1O60232 199 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 P0C879 139 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 Q6ZRM9 215 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 DMBX1Q8NFW5 382 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 OR4S2Q8NH73 311 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 ZNF471Q9BX82 626 aaPredicted RBP12.32□□□□□ -0.44
VRK3-207ENST00000594092 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 INSIG2Q9Y5U4 225 aa12.32□□□□□ -0.44
VRK3-207ENST00000594092 ODF3BA8MYP8 253 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 TOX4O94842 621 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 NXPH3O95157 252 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 SPDEFO95238 335 aa12.31□□□□□ -0.44
VRK3-207ENST00000594092 HOXB4P17483 251 aaPredicted RBP12.31□□□□□ -0.44
VRK3-207ENST00000594092 VAMP2P63027 116 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms