RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 PAX1P15863 534 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 LMO4P61968 165 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 HLA-DRB5Q30154 266 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 KCNRGQ8N5I3 272 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 ZNF383Q8NA42 475 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 NRGNQ92686 78 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 SIRT7Q9NRC8 400 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 PAIP2BQ9ULR5 123 aaKnown RBP12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 KPTNQ9Y664 436 aa12.17□□□□□ -0.46
GTF2F1-202ENST00000593678 CENPEQ02224 2701 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 NXPH3O95157 252 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 RPL12P30050 165 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 P2RY1P47900 373 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 REG1BP48304 166 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 ARHGDIBP52566 201 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 C1orf229Q6ZS94 237 aaPredicted RBP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 PNKDQ8N490 385 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 MRPL20Q9BYC9 149 aaKnown RBP12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 MAGT1Q9H0U3 335 aa12.16□□□□□ -0.46
GTF2F1-202ENST00000593678 CRYBG3Q68DQ2 2970 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 IGHV2-70DA0A0C4DH43 119 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 FAM90A26D6RGX4 464 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 TXNL1O43396 289 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 PITX3O75364 302 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 MED6O75586 246 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 MMP9P14780 707 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 PRTN3P24158 256 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 RAB13P51153 203 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 ZNF137PP52743 207 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 ID3Q02535 119 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 SSX9Q7RTT3 188 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 RPEQ96AT9 228 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 ARPC5LQ9BPX5 153 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 CACFD1Q9UGQ2 172 aa12.15□□□□□ -0.46
GTF2F1-202ENST00000593678 FAM90A9PA6NNJ1 464 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 KCNAB3O43448 404 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 BCL2L11O43521 198 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 GPR137BO60478 399 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 ARG1P05089 322 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 MC5RP33032 325 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 CEACAM3P40198 252 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 CAV2P51636 162 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 Q6ZRM9 215 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 RAB40CQ96S21 281 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 RGS13O14921 159 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 SHOXO15266 292 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 IFNA7P01567 189 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 RPL23AP62750 156 aaKnown RBP12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 IFITM2Q01629 132 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 GPR157Q5UAW9 335 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 ZNF767PQ75MW2 155 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 Q8N7P7 452 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 OR5AN1Q8NGI8 311 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 ST6GALNAC6Q969X2 333 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 RHOVQ96L33 236 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 SLC25A31Q9H0C2 315 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
GTF2F1-202ENST00000593678 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 H0YJW9 148 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 SYNGR2O43760 224 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 CHST1O43916 411 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 SLC25A16P16260 332 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 HTR1DP28221 377 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 DLX1P56177 255 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 OR11H6Q8NGC7 330 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 OR4C13Q8NGP0 309 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 LHX4Q969G2 390 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 BEX4Q9NWD9 120 aaPredicted RBP12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 INSIG2Q9Y5U4 225 aa12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
GTF2F1-202ENST00000593678 IGHV4-30-2A0A087WSY4 118 aa12.12□□□□□ -0.47
GTF2F1-202ENST00000593678 IGHV4-61A0A0C4DH41 118 aa12.12□□□□□ -0.47
GTF2F1-202ENST00000593678 LEUTXA8MZ59 168 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms