RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 TCF23Q7RTU1 214 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 CENPVQ7Z7K6 275 aaPredicted RBP8.55□□□□□ -1.04
VPS25-206ENST00000591584 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 ZNF251Q9BRH9 671 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 UQCC1Q9NVA1 299 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 FKBP11Q9NYL4 201 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
VPS25-206ENST00000591584 CARHSP1Q9Y2V2 147 aaKnown RBP8.55□□□□□ -1.04
VPS25-206ENST00000591584 CADP27708 2225 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 TRAV1-1A0A0B4J248 108 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 hCG_1809904A0A1W2PP81 198 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 A0A1W2PPE2 198 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 A0A1W2PR64 198 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 A0A1W2PRV1 198 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 DVL1O14640 695 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 GOSR1O95249 250 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 IFNA17P01571 189 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 APOC3P02656 99 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 SNCAP37840 140 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 TFF3Q07654 80 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 IZUMO4Q1ZYL8 232 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 TMEM155Q4W5P6 130 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 RPL39P5Q59GN2 51 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 OR2B11Q5JQS5 317 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 ZNF295-AS1Q8N0V1 137 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 ZCCHC24Q8N2G6 241 aaKnown RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 ZNF525Q8N782 197 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 OSR1Q8TAX0 266 aaPredicted RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 NEUROG1Q92886 237 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 RBMXL1Q96E39 390 aaKnown RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 TIMD4Q96H15 378 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 TMEM147Q9BVK8 224 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 DCAF16Q9NXF7 216 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
VPS25-206ENST00000591584 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
VPS25-206ENST00000591584 KIAA2026Q5HYC2 2103 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 C17orf112F2Z3M2 114 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 F8W036 122 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 SLC31A2O15432 143 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 NXPH3O95157 252 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 SNAPINO95295 136 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 PLAUP00749 431 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 APOA2P02652 100 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 MC5RP33032 325 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 RAB11AP62491 216 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 RELBQ01201 579 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 TMEM267Q0VDI3 215 aaPredicted RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 ZNF273Q14593 569 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 THNSL2Q86YJ6 484 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 TGIF2LYQ8IUE0 185 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 ZNF383Q8NA42 475 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 OR4A5Q8NH83 315 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 OR9G1Q8NH87 305 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 H1FXQ92522 213 aaKnown RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 RAB1CQ92928 201 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 WDR61Q9GZS3 305 aaKnown RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 NARFLQ9H6Q4 476 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 UNKLQ9H9P5 680 aaKnown RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 SLC35D1Q9NTN3 355 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 FOXA2Q9Y261 457 aaPredicted RBP8.53□□□□□ -1.04
VPS25-206ENST00000591584 ZNF257Q9Y2Q1 563 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 KPTNQ9Y664 436 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 POLEQ07864 2286 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 DYSFO75923 2080 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 CUL9Q8IWT3 2517 aa8.53□□□□□ -1.04
VPS25-206ENST00000591584 C15orf61A6NNL5 157 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 H3BP45 60 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 J3QR06 171 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 MPDU1O75352 247 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 IGHV2-70P01814 119 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 IL6RP08887 468 aaPredicted RBP8.52□□□□□ -1.05
VPS25-206ENST00000591584 OR9G9P0C7N8 305 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 CT45A6P0DMU7 189 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 CT45A5P0DMU8 189 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 CT45A7P0DMV0 189 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 ZNF137PP52743 207 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 PRRX1P54821 245 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 DLX6P56179 175 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 PMS2P11Q13670 270 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 LY6DQ14210 128 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 GUK1Q16774 197 aa8.52□□□□□ -1.05
VPS25-206ENST00000591584 VWC2Q2TAL6 325 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms