RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RFX2P48378 723 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 HNF4GQ14541 408 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 CDK10Q15131 360 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 RBMS2Q15434 407 aaKnown RBP7.43□□□□□ -1.22
BRCA1-226ENST00000591534 SURF2Q15527 256 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-226ENST00000591534 UTF1Q5T230 341 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 MOB3BQ86TA1 216 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 TGIF2LXQ8IUE1 241 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 IZUMO1Q8IYV9 350 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 OR8H1Q8NGG4 311 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 OR5H2Q8NGV7 314 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 OR10K1Q8NGX5 313 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 OR2T10Q8NGZ9 312 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 SNAPC3Q92966 411 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 COQ2Q96H96 371 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 NOL4LQ96MY1 436 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-226ENST00000591534 RASL11BQ9BPW5 248 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 SPATA25Q9BR10 227 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 PECRQ9BY49 303 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 LIN7CQ9NUP9 197 aaKnown RBP7.43□□□□□ -1.22
BRCA1-226ENST00000591534 KIF25Q9UIL4 384 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 PSG11Q9UQ72 335 aa7.43□□□□□ -1.22
BRCA1-226ENST00000591534 A0A1W2PPI3 338 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 TMEM30CPA0ZSE6 113 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 TMEM235A6NFC5 223 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 J3QRK9 145 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 HSPB6O14558 160 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 HSD17B6O14756 317 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 TXNL1O43396 289 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 SLC22A5O76082 557 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 RAB3DO95716 219 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 FCER2P06734 321 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 OR5H8P0DN80 308 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 CGB3P0DN86 165 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 CGB7P0DN87 165 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 GNB3P16520 340 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 VDAC1P21796 283 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 CDX1P47902 265 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-226ENST00000591534 GNG10P50151 68 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 TSPAN5P62079 268 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 ZNF816Q0VGE8 651 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-226ENST00000591534 FOXE3Q13461 319 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 STEAP1BQ6NZ63 245 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 HOGA1Q86XE5 327 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 PRR18Q8N4B5 295 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 DUSP18Q8NEJ0 188 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 OR5AP2Q8NGF4 316 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 OR52I2Q8NH67 350 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 ARHGAP5-AS1Q96IT6 56 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 DPCDQ9BVM2 203 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-226ENST00000591534 GHITMQ9H3K2 345 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 GPN1Q9HCN4 374 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-226ENST00000591534 ETAA1Q9NY74 926 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 NUBP2Q9Y5Y2 271 aa7.42□□□□□ -1.22
BRCA1-226ENST00000591534 NPIPB11E5RHQ5 1161 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 SOCS1O15524 211 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 SPINT2O43291 252 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 B3GALNT1O75752 331 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 SNAPC5O75971 98 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 RGS11O94810 467 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 CD74P04233 296 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 CD1BP29016 333 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 GPR12P47775 334 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 INSL3P51460 131 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 TAS2R31P59538 309 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 UBE2MP61081 183 aaKnown RBP7.41□□□□□ -1.22
BRCA1-226ENST00000591534 EBI3Q14213 229 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 LTC4SQ16873 150 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR10K2Q6IF99 312 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 SUMF2Q8NBJ7 301 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 ZBTB34Q8NCN2 500 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 BEST4Q8NFU0 473 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR52M1Q8NGK5 317 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR4A4PQ8NGN8 299 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR13A1Q8NGR1 328 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR6F1Q8NGZ6 308 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 OR4K15Q8NH41 348 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 RFESDQ8TAC1 157 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 ZFAND1Q8TCF1 268 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 MRGPRDQ8TDS7 321 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 LEAP2Q969E1 77 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 TRIM63Q969Q1 353 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 RAB24Q969Q5 203 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 MCUBQ9NWR8 336 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 SLC2A8Q9NY64 477 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
BRCA1-226ENST00000591534 TRAV24A0A0B4J272 114 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 IGHV1-3A0A0C4DH29 117 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 A0A1W2PP11 408 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 FOXI3A8MTJ6 420 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-226ENST00000591534 SEC14L6B5MCN3 397 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 MOSP00540 346 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 IGHV3-7P01780 117 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 KLF9Q13886 244 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-226ENST00000591534 OXA1LQ15070 435 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 BAK1Q16611 211 aa7.4□□□□□ -1.22
BRCA1-226ENST00000591534 PIGYQ3MUY2 71 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms