RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347		A0A0U1RQV5	110 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	hDV102S1	A0JD36	115 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	YPEL3	P61236	119 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PSG9	Q00887	426 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	FOXE3	Q13461	319 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PP6455	Q8WZ26	134 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	ARL2-SNX15	V9GYD0	113 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347		K7EN84	100 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	TRAF3IP2	O43734	574 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	TIMP3	P35625	211 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PRDX4	Q13162	271 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	C20orf204	Q6ZNR8	217 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	OR52L2P	Q8NGH6	319 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF488	Q96MN9	340 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PMCHL2	Q9BQD1	86 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	OR1A1	Q9P1Q5	309 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	YPEL5	P62699	121 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	FOXL1	Q12952	345 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	KLHDC1	Q8N7A1	406 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	NCOR1P1	Q9H4R4	102 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	CLCF1	Q9UBD9	225 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	RARRES3	Q9UL19	164 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGHV2-26	A0A0B4J1V2	119 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGHV1-69-2	A0A0G2JMI3	117 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347		A0A1W2PPC4	97 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	TUSC2	O75896	110 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	UQCRFS1	P47985	274 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	DOLPP1	Q86YN1	238 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	OR1N2	Q8NGR9	330 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	RNASE7	Q9H1E1	156 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347	KLRF1	Q9NZS2	232 aa		12.81	□□□□□ -0.36
CIRBP-228	ENST00000590347		K7ERU9	68 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF324	O75467	553 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	SLC25A6	P12236	298 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	VASH2	Q86V25	355 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF439	Q8NDP4	499 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGKV3-11	P04433	115 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	GPR6	P46095	362 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	MMD2	Q8IY49	270 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347	SVIP	Q8NHG7	77 aa		12.8	□□□□□ -0.36
CIRBP-228	ENST00000590347		A0A087X0K7	114 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	VENTX	O95231	258 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	PRRX1	P54821	245 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	LINC00205	P59089	165 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	GRB2	P62993	217 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	DAZAP2	Q15038	168 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	RAET1L	Q5VY80	246 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	SLC25A47	Q6Q0C1	308 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF611	Q8N823	705 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	SLC24A4	Q8NFF2	622 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	KCNS1	Q96KK3	526 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	QTRT1	Q9BXR0	403 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	SERTAD4	Q9NUC0	356 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	HS3ST3A1	Q9Y663	406 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	DCHS1	Q96JQ0	3298 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	CD24	P25063	80 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	NHLRC2	Q8NBF2	726 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	TSKU	Q8WUA8	353 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	TMEM234	Q8WY98	164 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	BCL3	P20749	454 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	CCNO	P22674	350 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	GABRA6	Q16445	453 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	EBLN2	Q6P2I7	272 aa		12.79	□□□□□ -0.36
CIRBP-228	ENST00000590347	TMEM131	Q92545	1883 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGHV5-51	A0A0C4DH38	117 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	SSTR5	P35346	364 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	RBM11	P57052	281 aa	Known RBP	12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	OR2D3	Q8NGH3	330 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	RNF212B	A8MTL3	300 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	ARL14EPL	P0DKL9	152 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	COX5A	P20674	150 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	EPHA8	P29322	1005 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	MORN2	Q502X0	79 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	RNASEK	Q6P5S7	137 aa	Known RBP	12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	FSCN3	Q9NQT6	498 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	TECR	Q9NZ01	308 aa	Known RBP	12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	COPS7A	Q9UBW8	275 aa		12.78	□□□□□ -0.36
CIRBP-228	ENST00000590347	RRH	O14718	337 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZG16	O60844	167 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	RAC2	P15153	192 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	ARR3	P36575	388 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	TNXA	Q16473	311 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	FAM69B	Q5VUD6	431 aa		12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.77	□□□□□ -0.36
CIRBP-228	ENST00000590347	KIR2DS5	A0A0G2JLQ3	304 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347		A0A0G2JNG1	304 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	FAM166B	A8MTA8	275 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347		H0Y980	276 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	KIR2DS3	K7RE56	304 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347		M0R296	226 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	CORT	O00230	105 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	S1PR2	O95136	353 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	KIR2DS5	Q14953	304 aa		12.77	□□□□□ -0.37
CIRBP-228	ENST00000590347	LINC00173	Q6ZV60	143 aa		12.77	□□□□□ -0.37

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