RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 ZNF429Q86V71 674 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 OR11H1Q8NG94 326 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 OR1N2Q8NGR9 330 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 ACOT12Q8WYK0 555 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 ARPC1AQ92747 370 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 PARP12Q9H0J9 701 aaKnown RBP8.18□□□□□ -1.1
LIG3-212ENST00000590181 FBXL15Q9H469 300 aa8.18□□□□□ -1.1
LIG3-212ENST00000590181 TRIM64CA6NLI5 447 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 ACTL6BO94805 426 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 TPPPO94811 219 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 CNTFRP26992 372 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 MAS1LP35410 378 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 MXD1Q05195 221 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
LIG3-212ENST00000590181 UBE2NLQ5JXB2 153 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 UNQ5815/PRO19632Q6UWF5 114 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 C5orf24Q7Z6I8 188 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 SLC25A42Q86VD7 318 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 HOGA1Q86XE5 327 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 DRAXINQ8NBI3 349 aaPredicted RBP8.17□□□□□ -1.1
LIG3-212ENST00000590181 BEST4Q8NFU0 473 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 LGALS14Q8TCE9 139 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 DDB2Q92466 427 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 USMG5Q96IX5 58 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 ZNF230Q9UIE0 474 aaPredicted RBP8.17□□□□□ -1.1
LIG3-212ENST00000590181 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
LIG3-212ENST00000590181 TRAV18A0A075B6X5 111 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 SMIM31A0A1B0GVY4 71 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 A0A1W2PN81 502 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 LINC01619G3V211 115 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 G3V318 75 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 SLC25A17O43808 307 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 TUSC2O75896 110 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 HRASP01112 189 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 CRYGBP07316 175 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 LGALS1P09382 135 aaKnown RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 EGR2P11161 476 aaPredicted RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 SNRPBP14678 240 aaKnown RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 CHRNA7P36544 502 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 GLDNQ6ZMI3 551 aaPredicted RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 CADM3Q8N126 398 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 OR4S2Q8NH73 311 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 ABHD5Q8WTS1 349 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 GIMAP1Q8WWP7 306 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 YIPF6Q96EC8 236 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 AUNIPQ9H7T9 357 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 RBMX2Q9Y388 322 aaKnown RBP8.16□□□□□ -1.1
LIG3-212ENST00000590181 LYSTQ99698 3801 aa8.16□□□□□ -1.1
LIG3-212ENST00000590181 A0A0B4J203 849 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 C13orf42A0A1B0GVH6 325 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 FCN1O00602 326 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 RBFOX2O43251 390 aaKnown RBP eCLIP8.15□□□□□ -1.1
LIG3-212ENST00000590181 CA2P00918 260 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 IGLV2-23P01705 113 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 ZP3P21754 424 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 HOXD3P31249 432 aaPredicted RBP8.15□□□□□ -1.1
LIG3-212ENST00000590181 TAS2R46P59540 309 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 CDK10Q15131 360 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 TATDN3Q17R31 274 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 ECSCRQ19T08 205 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 DHRS11Q6UWP2 260 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 POC5Q8NA72 575 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 BVESQ8NE79 360 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 LFNGQ8NES3 379 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 OR5AP2Q8NGF4 316 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 OR4A5Q8NH83 315 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 SLC25A46Q96AG3 418 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 SLC25A38Q96DW6 304 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 RHOVQ96L33 236 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 ELOVL1Q9BW60 279 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
LIG3-212ENST00000590181 RANGRFQ9HD47 186 aaPredicted RBP8.15□□□□□ -1.1
LIG3-212ENST00000590181 SEC14L6B5MCN3 397 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 OVOL1O14753 267 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 CRYZL1O95825 349 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 DHFRP00374 187 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 APOA1P02647 267 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 NHLRC4P0CG21 123 aaPredicted RBP8.14□□□□□ -1.11
LIG3-212ENST00000590181 S100GP29377 79 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 RPS19P39019 145 aaKnown RBP8.14□□□□□ -1.11
LIG3-212ENST00000590181 CATR1Q13166 79 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 PRSS8Q16651 343 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 LPCAT3Q6P1A2 487 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 MZT2AQ6P582 158 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 NUDCD2Q8WVJ2 157 aa8.14□□□□□ -1.11
LIG3-212ENST00000590181 MAFIPQ8WZ33 124 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms