RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 BTCP35070 178 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 RPS16P62249 146 aaKnown RBP10.9□□□□□ -0.66
VMP1-210ENST00000589823 C11orf88Q6PI97 169 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 CCBE1Q6UXH8 406 aaPredicted RBP10.9□□□□□ -0.66
VMP1-210ENST00000589823 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 TCTEX1D1Q8N7M0 179 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 OR8H1Q8NGG4 311 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 OR4S2Q8NH73 311 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 CD300LFQ8TDQ1 290 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 RNF5Q99942 180 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
VMP1-210ENST00000589823 SLC25A33Q9BSK2 321 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 C5orf66Q9H5L9 145 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 C1RLQ9NZP8 487 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 CUBNO60494 3623 aa10.9□□□□□ -0.67
VMP1-210ENST00000589823 NCBP2LA6PVI3 153 aaKnown RBP10.89□□□□□ -0.67
VMP1-210ENST00000589823 SHOXO15266 292 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 CRYZL1O95825 349 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 CRYBA1P05813 215 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 AKR1C4P17516 323 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 SLC6A1P30531 599 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 LGALS7P47929 136 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 MMDQ15546 238 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 FBLN7Q53RD9 439 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 TMED4Q7Z7H5 227 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 SGPP2Q8IWX5 399 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 Q8N6K4 173 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 OSR1Q8TAX0 266 aaPredicted RBP10.89□□□□□ -0.67
VMP1-210ENST00000589823 ENKURQ8TC29 256 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 HARBI1Q96MB7 349 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
VMP1-210ENST00000589823 PALMDQ9NP74 551 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 KIAA1456Q9P272 454 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 MOB4Q9Y3A3 225 aa10.89□□□□□ -0.67
VMP1-210ENST00000589823 C3orf85A0A1B0GTC6 90 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 M0QZK8 103 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 HAX1O00165 279 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 NBR2O15453 112 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.67
VMP1-210ENST00000589823 PEX14O75381 377 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 B3GALNT1O75752 331 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 TCRBP04435 133 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 TAS2R31P59538 309 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
VMP1-210ENST00000589823 TMEM177Q53S58 311 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 ADAD2Q8NCV1 583 aaKnown RBP10.88□□□□□ -0.67
VMP1-210ENST00000589823 RBMXL1Q96E39 390 aaKnown RBP10.88□□□□□ -0.67
VMP1-210ENST00000589823 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 FAM212BQ9NTI7 297 aaPredicted RBP10.88□□□□□ -0.67
VMP1-210ENST00000589823 KCNIP3Q9Y2W7 256 aa10.88□□□□□ -0.67
VMP1-210ENST00000589823 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.67
VMP1-210ENST00000589823 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 CRYM-AS1A6NIL9 109 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 H0Y980 276 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
VMP1-210ENST00000589823 FGF16O43320 207 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 CHST1O43916 411 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 RAMP3O60896 148 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 HPRT1P00492 218 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 SERPINE2P07093 398 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 DCTN2Q13561 401 aaKnown RBP10.87□□□□□ -0.67
VMP1-210ENST00000589823 PLGLAQ15195 96 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 RITA1Q96K30 269 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 RASL11BQ9BPW5 248 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 AIFM2Q9BRQ8 373 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 C20orf85Q9H1P6 137 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 FLVCR2Q9UPI3 526 aa10.87□□□□□ -0.67
VMP1-210ENST00000589823 RRHO14718 337 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 SPDEFO95238 335 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 HRASP01112 189 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 ANXA3P12429 323 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 CNTFRP26992 372 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 LPAR6P43657 344 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 F2RL1P55085 397 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 BRWD1-AS2P59051 145 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 UBE2MP61081 183 aaKnown RBP10.86□□□□□ -0.67
VMP1-210ENST00000589823 SRSF2Q01130 221 aaKnown RBP10.86□□□□□ -0.67
VMP1-210ENST00000589823 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 VMA21Q3ZAQ7 101 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 TMEM128Q5BJH2 165 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 SLC25A42Q86VD7 318 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 C5orf56Q8N8D9 126 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 NPBQ8NG41 125 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 ZFAND2BQ8WV99 257 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 TMEM230Q96A57 120 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 PLEKHA2Q9HB19 425 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 PLSCR3Q9NRY6 295 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 COMMD9Q9P000 198 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 NUBP2Q9Y5Y2 271 aa10.86□□□□□ -0.67
VMP1-210ENST00000589823 SLC25A17O43808 307 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 S1PR2O95136 353 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 NDUFA3O95167 84 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 RPA2P15927 270 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 NQO2P16083 231 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 VAMP1P23763 118 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 ERVK-16P61578 105 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms