RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 PF4V1P10720 104 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 TAS2R46P59540 309 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 UBE2KP61086 200 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 RPL30P62888 115 aaKnown RBP13.73□□□□□ -0.21
H3F3B-207ENST00000589417 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-207ENST00000589417 KIAA0141Q14154 515 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-207ENST00000589417 SPCS2Q15005 226 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 KPRPQ5T749 579 aaPredicted RBP13.73□□□□□ -0.21
H3F3B-207ENST00000589417 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 LYSMD2Q8IV50 215 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 ZNF695Q8IW36 515 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 TEX45Q8NA69 505 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 HARBI1Q96MB7 349 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 PRELID3BQ9Y3B1 194 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 FBXO7Q9Y3I1 522 aa13.73□□□□□ -0.21
H3F3B-207ENST00000589417 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 J3QRK9 145 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 SHOXO15266 292 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 SLC25A17O43808 307 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 CA2P00918 260 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 SSBP2P81877 361 aaPredicted RBP13.72□□□□□ -0.21
H3F3B-207ENST00000589417 MRGPRG-AS1Q2M3A8 158 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 MFSD4AQ8N468 514 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 C15orf40Q8WUR7 153 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
H3F3B-207ENST00000589417 WSB1Q9Y6I7 421 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
H3F3B-207ENST00000589417 CRYZL1O95825 349 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 MYCNOSP40205 109 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 KHDC1LQ5JSQ8 128 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 C18orf65Q6ZTR6 163 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 KCTD9Q7L273 389 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 BORCS5Q969J3 196 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 TMEM68Q96MH6 324 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 P2RX4Q99571 388 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 TPSG1Q9NRR2 321 aa13.71□□□□□ -0.21
H3F3B-207ENST00000589417 ARPC1BO15143 372 aaKnown RBP13.7□□□□□ -0.22
H3F3B-207ENST00000589417 BRI3O95415 125 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 RFX2P48378 723 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 RAB9AP51151 201 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 RUNX1Q01196 453 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 FXYD3Q14802 87 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 VMA21Q3ZAQ7 101 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 LINC00482Q8N8I6 264 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 ZNF491Q8N8L2 437 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 OR5M8Q8NGP6 311 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 OR5H2Q8NGV7 314 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 ARPC1AQ92747 370 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 MOB3AQ96BX8 217 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 EHFQ9NZC4 300 aa13.7□□□□□ -0.22
H3F3B-207ENST00000589417 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
H3F3B-207ENST00000589417 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-207ENST00000589417 FAM25AB3EWG3 89 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 FAM25CB3EWG5 89 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 FAM25GB3EWG6 89 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■■■□ 21.1
H3F3B-207ENST00000589417 SOX15O60248 233 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 FCGR3BO75015 233 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 PF4P02776 101 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 FCER2P06734 321 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 GNRHRP30968 328 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 RCVRNP35243 200 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 KIR2DS2P43631 304 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 PJVKQ0ZLH3 352 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 BEAN1Q3B7T3 259 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 TMEM65Q6PI78 240 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 LCNL1Q6ZST4 164 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 C8orf86Q6ZUL3 223 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 MRPL41Q8IXM3 137 aaKnown RBP13.69□□□□□ -0.22
H3F3B-207ENST00000589417 KLHL30-AS1Q8NEE0 82 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 OR4S2Q8NH73 311 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 SECTM1Q8WVN6 248 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 C4orf3Q8WVX3 66 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 CLCC1Q96S66 551 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 SLC5A7Q9GZV3 580 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 EXTL2Q9UBQ6 330 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 SCOCQ9UIL1 159 aa13.69□□□□□ -0.22
H3F3B-207ENST00000589417 G3V4G9 280 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 H3BMQ9 156 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 CTDSP2O14595 271 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 DUS4LO95620 317 aaKnown RBP13.68□□□□□ -0.22
H3F3B-207ENST00000589417 PMP2P02689 132 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 DEFA6Q01524 100 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 PRSS8Q16651 343 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 VAX1Q5SQQ9 334 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 LFNGQ8NES3 379 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 ISOC1Q96CN7 298 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 RCC1LQ96I51 464 aaKnown RBP13.68□□□□□ -0.22
H3F3B-207ENST00000589417 ABHD1Q96SE0 405 aa13.68□□□□□ -0.22
H3F3B-207ENST00000589417 ZNF2Q9BSG1 426 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms