RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 MED12LQ86YW9 2145 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 A0A1W2PPE2 198 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 ODAMA1E959 279 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 MAP1LC3B2A6NCE7 125 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 SRRM5B3KS81 715 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 UBE2CO00762 179 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 CYB5BO43169 146 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 YPEL1O60688 119 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF737O75373 536 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 NDUFS6O75380 124 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 S1PR2O95136 353 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 HPRT1P00492 218 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 CGAP01215 116 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 IGHV3-13P01766 116 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 GLRXP35754 106 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 KIR2DS2P43631 304 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 RPS10P46783 165 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 MEOX2P50222 304 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 RAB7AP51149 207 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 RPS16P62249 146 aaKnown RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 GNB2P62879 340 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 EDDM3AQ14507 147 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 OR2B11Q5JQS5 317 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 FAM180AQ6UWF9 173 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 YPEL2Q96QA6 119 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 MAP1LC3BQ9GZQ8 125 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 OPN3Q9H1Y3 402 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-206ENST00000589117 FZR1Q9UM11 496 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 SLC25A15Q9Y619 301 aa6.17□□□□□ -1.42
ZNF540-206ENST00000589117 hCG_1809904A0A1W2PP81 198 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 A0A1W2PR64 198 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 A0A1W2PRV1 198 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 MARCH11A6NNE9 402 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 C17orf98A8MV24 154 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 AP4M1O00189 453 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 RBFOX2O43251 390 aaKnown RBP eCLIP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 P0C879 139 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 SSTR5P35346 364 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR2B8PP59922 312 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ARL16Q0P5N6 197 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 EIF4EBP1Q13541 118 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 Q3ZCU0 254 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR13A1Q8NGR1 328 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR4A16Q8NH70 328 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 RFESDQ8TAC1 157 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CTDSP1Q9GZU7 261 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 NCOR1P1Q9H4R4 102 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 DKK4Q9UBT3 224 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ESPL1Q14674 2120 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 DOCK7Q96N67 2140 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CLDN34H7C241 214 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 M0R1B8 84 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 MPDU1O75352 247 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 FGF7P21781 194 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 TIMP3P35625 211 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF83P51522 516 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ELLP55199 621 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 SPCS3P61009 180 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 RPL30P62888 115 aaKnown RBP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CD69Q07108 199 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CR1LQ2VPA4 569 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ACOT6Q3I5F7 207 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 MORN2Q502X0 79 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 KRTCAP3Q53RY4 240 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CFAP161Q6P656 301 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 BTNL3Q6UXE8 466 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR10G9Q8NGN4 311 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR10G7Q8NGN6 311 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 OR13D1Q8NGV5 346 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 R3HDM4Q96D70 268 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 S1PR3Q99500 378 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 AGMATQ9BSE5 352 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 C1orf43Q9BWL3 253 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 ESRP2Q9H6T0 727 aaKnown RBP6.16□□□□□ -1.42
ZNF540-206ENST00000589117 CLN8Q9UBY8 286 aa6.16□□□□□ -1.42
ZNF540-206ENST00000589117 BDP1A6H8Y1 2624 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF727A8MUV8 499 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 DEFB108AA8MXU0 73 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 TMEM250H0YL14 139 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 C15orf65H3BRN8 121 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 ITGB1BP1O14713 200 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 CYB5R3P00387 301 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-206ENST00000589117 AMY1AP04745 511 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 EDDM3BP56851 147 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-206ENST00000589117 FABP9Q0Z7S8 132 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 HAPLN4Q86UW8 402 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 CD177Q8N6Q3 437 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 OR52E5Q8NH55 327 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 S100PBPQ96BU1 408 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 OR2V2Q96R30 315 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 GGACTQ9BVM4 153 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 SFXN3Q9BWM7 321 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms