RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 C16orf78Q8WTQ4 265 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 Q8WTZ3 238 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 ASB13Q8WXK3 278 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 TMBIM1Q969X1 311 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 SMIM19Q96E16 107 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 TIPINQ9BVW5 301 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 CXCL16Q9H2A7 254 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 C16orf95Q9H693 158 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 FAM206AQ9NX38 181 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 EMC3Q9P0I2 261 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 SAMHD1Q9Y3Z3 626 aaKnown RBP1.42□□□□□ -2.18
SMAD4-207ENST00000589076 MINOS1-NBL1R4GNA1 71 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 NCKAP5O14513 1909 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 RIF1Q5UIP0 2472 aaKnown RBP1.42□□□□□ -2.18
SMAD4-207ENST00000589076 NBEAQ8NFP9 2946 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 WDR90Q96KV7 1748 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 COL11A1P12107 1806 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 VPS37CA5D8V6 355 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 C19orf71A6NCJ1 209 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 MRASO14807 208 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 BIRC5O15392 142 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 GSTZ1O43708 216 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 P0DMU3 169 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 FAM231AP0DMU4 169 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 FAM231CP0DMU5 169 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 CD200P41217 278 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 RPL14P50914 215 aaKnown RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 DAPP51397 102 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 MED21Q13503 144 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 DNAJB3Q8WWF6 145 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 MS4A6EQ96DS6 147 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 CPNE2Q96FN4 548 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 PACRGQ96M98 296 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 TXNDC17Q9BRA2 123 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 NKX6-2Q9C056 277 aaPredicted RBP1.41□□□□□ -2.18
SMAD4-207ENST00000589076 HDGFL3Q9Y3E1 203 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 REREQ9P2R6 1566 aa1.41□□□□□ -2.18
SMAD4-207ENST00000589076 SIPA1L1O43166 1804 aa1.4□□□□□ -2.18
SMAD4-207ENST00000589076 CEP250Q9BV73 2442 aa1.4□□□□□ -2.18
SMAD4-207ENST00000589076 CENPFP49454 3210 aa1.4□□□□□ -2.18
SMAD4-207ENST00000589076 VWDEQ8N2E2 1590 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 MUC21A0A0G2JKD1 596 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 MUC21A0A140T8X8 626 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 TINCRA0A1B0GVN0 87 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 A0A1W2PQL4 384 aaPredicted RBP1.4□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM235A6NFC5 223 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 GOLGA8KD6RF30 607 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 H3BPC8 53 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 GOLGA8MH3BSY2 632 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 IL6P05231 212 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 TPM3P06753 285 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 GZMBP10144 247 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 CCL3P10147 92 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 CD36P16671 472 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 IFNGR2P38484 337 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 PSMD8P48556 350 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 SNAP25P60880 206 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 HPCAP84074 193 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 FABP5Q01469 135 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 SS18Q15532 418 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 Q8N402 240 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 TMEM251Q8N6I4 163 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 KCTD7Q96MP8 289 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 MS4A6AQ9H2W1 248 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 PLEKHJ1Q9NW61 149 aa1.4□□□□□ -2.19
SMAD4-207ENST00000589076 MDC1Q14676 2089 aaKnown RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 CNOT1A5YKK6 2376 aaKnown RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 A0A0A6YYH2 397 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 A6NJ64 397 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 OR11H12B2RN74 326 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 FNDC10F2Z333 226 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 F5H768 121 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 J3QKU1 62 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 M0R381 172 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 COCHO43405 550 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 S1PR2O95136 353 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 PRB4P10163 310 aaPredicted RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 UGT2B7P16662 529 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 CXCL2P19875 107 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 CXCL3P19876 107 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 CRYBB3P26998 211 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 RPS24P62847 133 aaKnown RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 TPM4P67936 248 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 DEFB103AP81534 67 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 GNA13Q14344 377 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 LGALS9CQ6DKI2 356 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 AMTNQ6UX39 209 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 C2orf91Q6ZV80 131 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 BAP18Q8IXM2 172 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 OR11H2Q8NH07 326 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 KLF6Q99612 283 aaPredicted RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 MIEN1Q9BRT3 115 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 DRC3Q9H069 523 aa1.39□□□□□ -2.19
SMAD4-207ENST00000589076 NSRP1Q9H0G5 558 aaKnown RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 PCYT1BQ9Y5K3 369 aaPredicted RBP1.39□□□□□ -2.19
SMAD4-207ENST00000589076 PTPRSQ13332 1948 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 TLN2Q9Y4G6 2542 aa1.38□□□□□ -2.19
SMAD4-207ENST00000589076 CEP164Q9UPV0 1460 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms