RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 ABCC10Q5T3U5 1492 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 DHX57Q6P158 1386 aaKnown RBP4.46□□□□□ -1.7
VMP1-208ENST00000588617 IGLV2-18A0A075B6J9 118 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 A0A1B0GV50 99 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 ATP6V0CP27449 155 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 CRABP1P29762 137 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 EDDM3AQ14507 147 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 PLPPR5Q32ZL2 321 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 ZNF660Q6AZW8 331 aaPredicted RBP4.46□□□□□ -1.7
VMP1-208ENST00000588617 ALKAL1Q6UXT8 129 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 HMGN2P46Q86SG4 172 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 LY6G5BQ8NDX9 201 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 DCUN1D1Q96GG9 259 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 PTPN23Q9H3S7 1636 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 TTC21AQ8NDW8 1320 aa4.46□□□□□ -1.7
VMP1-208ENST00000588617 NAV1Q8NEY1 1877 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 ITSN2Q9NZM3 1697 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 SHANK2Q9UPX8 1470 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 APOMO95445 188 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 VBP1P61758 197 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 TAF1AQ15573 450 aaPredicted RBP4.45□□□□□ -1.7
VMP1-208ENST00000588617 GUK1Q16774 197 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 ACOT6Q3I5F7 207 aaPredicted RBP4.45□□□□□ -1.7
VMP1-208ENST00000588617 ZFAND6Q6FIF0 208 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 TMEM136Q6ZRR5 245 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 ZFAND2AQ8N6M9 145 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 OR2T4Q8NH00 348 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 LHFPL5Q8TAF8 219 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 CD200R1Q8TD46 325 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 OR5P3Q8WZ94 311 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 CPNE2Q96FN4 548 aaPredicted RBP4.45□□□□□ -1.7
VMP1-208ENST00000588617 CEP19Q96LK0 163 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 OR52E6Q96RD3 313 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 C1QTNF6Q9BXI9 259 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 CXorf21Q9HAI6 301 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 CYTL1Q9NRR1 136 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 STOML2Q9UJZ1 356 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 CRB1P82279 1406 aa4.45□□□□□ -1.7
VMP1-208ENST00000588617 ADGRL2O95490 1459 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 OR4C45A6NMZ5 311 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 PSMD12O00232 456 aaPredicted RBP4.44□□□□□ -1.7
VMP1-208ENST00000588617 IGKV3-11P04433 115 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 FABP9Q0Z7S8 132 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 TMEM97Q5BJF2 176 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 DNLZQ5SXM8 178 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 STX12Q86Y82 276 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 OR2D3Q8NGH3 330 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 C12orf43Q96C57 262 aaKnown RBP4.44□□□□□ -1.7
VMP1-208ENST00000588617 HHLA2Q9UM44 414 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 PKIGQ9Y2B9 76 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 DAPK1P53355 1430 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 NAIPQ13075 1403 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 KIAA1107Q9UPP5 1409 aa4.44□□□□□ -1.7
VMP1-208ENST00000588617 PLEKHH2Q8IVE3 1493 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 IGKV1D-37A0A075B6S9 117 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 A0A087WUJ7 227 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 IGHMP01871 453 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 TAS2R45P59539 299 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 PSME3P61289 254 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
VMP1-208ENST00000588617 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 ZNF680Q8NEM1 530 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 OR4K13Q8NH42 304 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 CCL13Q99616 98 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 ZNF443Q9Y2A4 671 aaPredicted RBP4.43□□□□□ -1.7
VMP1-208ENST00000588617 COQ4Q9Y3A0 265 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 PRELID3BQ9Y3B1 194 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 CAMSAP2Q08AD1 1489 aa4.43□□□□□ -1.7
VMP1-208ENST00000588617 OR6C6A6NF89 314 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 A8MWP6 167 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 INMT-MINDY4F8WBC2 141 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 ABCC5O15440 1437 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 ARHGEF5Q12774 1597 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 PYCR3Q53H96 274 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 HACD4Q5VWC8 232 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 SSH2Q76I76 1423 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 RNF182Q8N6D2 247 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
VMP1-208ENST00000588617 PPP1R2P1Q96PQ5 205 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 TRIM4Q9C037 500 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 DCSTAMPQ9H295 470 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 SAMHD1Q9Y3Z3 626 aaKnown RBP4.42□□□□□ -1.7
VMP1-208ENST00000588617 MMACHCQ9Y4U1 282 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 ARID1AO14497 2285 aa4.42□□□□□ -1.7
VMP1-208ENST00000588617 ANKRD30AQ9BXX3 1397 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 ERCC6L2Q5T890 1561 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 CCDC144AA2RUR9 1427 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 NCOA1Q15788 1441 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 IGHV1-69-2A0A0G2JMI3 117 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 PQLC2LA1A4F0 135 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 BHLHE40O14503 412 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 COX7A2LO14548 114 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 HAND1O96004 215 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 CRYGDP07320 174 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 SERPINB9P50453 376 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 GZMMP51124 257 aa4.41□□□□□ -1.7
VMP1-208ENST00000588617 HOXC5Q00444 222 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms