RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 C3orf85A0A1B0GTC6 90 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 HOXA3O43365 443 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 FCGR3BO75015 233 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 MOSP00540 346 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 IGKV1-16P04430 117 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 AKR1C4P17516 323 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 CD24P25063 80 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 RGS21Q2M5E4 152 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 TMEM177Q53S58 311 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 SGPP2Q8IWX5 399 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 OR4C13Q8NGP0 309 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 EAF1Q96JC9 268 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 RNF5Q99942 180 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 ALX4Q9H161 411 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 VPREB3Q9UKI3 123 aa13.59□□□□□ -0.23
PRKCSH-203ENST00000586486 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 A6NDX4 124 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 CLDN34H7C241 214 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 HILS1P60008 231 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 SUPT4H1P63272 117 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 FBLN7Q53RD9 439 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 OR2B11Q5JQS5 317 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 C11orf88Q6PI97 169 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 PLET1Q6UQ28 207 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 LIAT1Q6ZQX7 453 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 OSR1Q8TAX0 266 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 FLYWCH2Q96CP2 140 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 TP53RKQ96S44 253 aa13.58□□□□□ -0.24
PRKCSH-203ENST00000586486 TRAV6A0A075B6T7 132 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 A0A0A6YYJ9 748 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 DNAJC9-AS1A6NH13 148 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 RAMP3O60896 148 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 PEX14O75381 377 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 CRYZL1O95825 349 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM11P17152 192 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 RAG2P55895 527 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 HES1Q14469 280 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 OR8H1Q8NGG4 311 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 MARVELD1Q9BSK0 173 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 OR5AC1P0C628 307 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 VSIG10L2P0DP72 767 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 ANXA7P20073 488 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 UCP1P25874 307 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 SLC9A3R2Q15599 337 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 ZNF585BQ52M93 769 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 CCBE1Q6UXH8 406 aaPredicted RBP13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 C16orf82Q7Z2V1 217 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 ESM1Q9NQ30 184 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 KCNIP3Q9Y2W7 256 aa13.57□□□□□ -0.24
PRKCSH-203ENST00000586486 OR2F2O95006 317 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 HPRT1P00492 218 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 OR4E1P0C645 316 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 ANXA3P12429 323 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 RPA2P15927 270 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 LGALS7P47929 136 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 PPP1R1AQ13522 171 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 GLYATL2Q8WU03 294 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 HARBI1Q96MB7 349 aa13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 RBM14Q96PK6 669 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-203ENST00000586486 CUBNO60494 3623 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 SPDEFO95238 335 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 IFNA2P01563 188 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 SERPINE2P07093 398 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 SPNP16150 400 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 LY6EQ16553 131 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 RITA1Q96K30 269 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 TSNAXQ99598 290 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 CHIAQ9BZP6 476 aa13.55□□□□□ -0.24
PRKCSH-203ENST00000586486 HAX1O00165 279 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 SHOXO15266 292 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 S1PR2O95136 353 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 NDUFA3O95167 84 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 SFT2D2O95562 160 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 HLA-AP01891 365 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 VAMP1P23763 118 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 RPS16P62249 146 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 DHRS2Q13268 280 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 HNF4GQ14541 408 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM187Q14656 261 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 OXA1LQ15070 435 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 POU2AF1Q16633 256 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 SP6Q3SY56 376 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 NPBQ8NG41 125 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 SLC25A33Q9BSK2 321 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 PLSCR3Q9NRY6 295 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 C1RLQ9NZP8 487 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
PRKCSH-203ENST00000586486 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 INMT-MINDY4F8WBC2 141 aa13.53□□□□□ -0.24
PRKCSH-203ENST00000586486 NBR2O15453 112 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms