RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ZNF471Q9BX82 626 aaPredicted RBP8.54□□□□□ -1.04
LIG3-203ENST00000585370 UBTD1Q9HAC8 227 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 C19orf12Q9NSK7 152 aa8.54□□□□□ -1.04
LIG3-203ENST00000585370 RAI1Q7Z5J4 1906 aaPredicted RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 A0A087X0M5 115 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 A0A1B0GX30 115 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 M0R1X1 148 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 TOR1AO14656 332 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 JTBO76095 146 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 GAPDHP04406 335 aaKnown RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 RRASP10301 218 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 TPT1P13693 172 aaKnown RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 S100A1P23297 94 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 OMGP23515 440 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 HTR2BP41595 481 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 ZNF134P52741 427 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 TAS2R30P59541 319 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 RPL23AP62750 156 aaKnown RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 RPL30P62888 115 aaKnown RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 C8orf46Q8TAG6 207 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 ZNF596Q8TC21 504 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 IGFBPL1Q8WX77 278 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 ST8SIA2Q92186 375 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 TNFRSF14Q92956 283 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 PERPQ96FX8 193 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 C5orf30Q96GV9 206 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 SLC25A32Q9H2D1 315 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 IFI27L2Q9H2X8 130 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 CTSZQ9UBR2 303 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 RCL1Q9Y2P8 373 aaKnown RBP8.53□□□□□ -1.04
LIG3-203ENST00000585370 SVEP1Q4LDE5 3571 aa8.53□□□□□ -1.04
LIG3-203ENST00000585370 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 BORCS7-ASMTA0A0B4J1R7 106 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 HAX1O00165 279 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 SMAD7O15105 426 aaKnown RBP8.52□□□□□ -1.05
LIG3-203ENST00000585370 PPIHO43447 177 aaKnown RBP8.52□□□□□ -1.05
LIG3-203ENST00000585370 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.05
LIG3-203ENST00000585370 IGKV1-5P01602 117 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 P0C879 139 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 EFNA4P52798 201 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 DLX6P56179 175 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 ERVK-16P61578 105 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 BAXQ07812 192 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 ZNF273Q14593 569 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 CXorf66Q5JRM2 361 aaPredicted RBP8.52□□□□□ -1.05
LIG3-203ENST00000585370 PRAMEF5Q5TYX0 476 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 DHRS7BQ6IAN0 325 aaPredicted RBP8.52□□□□□ -1.05
LIG3-203ENST00000585370 ZNF841Q6ZN19 808 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 BAP18Q8IXM2 172 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 OR2C3Q8N628 320 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 DMBX1Q8NFW5 382 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 OR4S2Q8NH73 311 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 C11orf1Q9H5F2 150 aa8.52□□□□□ -1.05
LIG3-203ENST00000585370 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 LINC00473A8K010 186 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 LYNX1G3V0Z9 82 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 SYNGR2O43760 224 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 CHST1O43916 411 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 PROP1O75360 226 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 SCAF4O95104 1147 aaKnown RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 SPDEFO95238 335 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 HRASP01112 189 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 LYNX1P0DP58 116 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 PAX1P15863 534 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 EPHA1P21709 976 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 IL3RAP26951 378 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 PRRX1P54821 245 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 BRWD1-AS2P59051 145 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 POLR2GP62487 172 aaKnown RBP eCLIP8.51□□□□□ -1.05
LIG3-203ENST00000585370 ZNF816Q0VGE8 651 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 WDR25Q64LD2 544 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 NCR3LG1Q68D85 454 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 FAM53AQ6NSI3 398 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 BTNL3Q6UXE8 466 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 LYG1Q8N1E2 194 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 OR9G1Q8NH87 305 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 DDB2Q92466 427 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 SMIM8Q96KF7 97 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 CIB3Q96Q77 187 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 MDFIQ99750 246 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 ZNF251Q9BRH9 671 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 PATZ1Q9HBE1 687 aaKnown RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 CYTL1Q9NRR1 136 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 LYRM2Q9NU23 88 aaPredicted RBP8.51□□□□□ -1.05
LIG3-203ENST00000585370 CACNG5Q9UF02 275 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 WSB1Q9Y6I7 421 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 SESN1Q9Y6P5 492 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 STAB1Q9NY15 2570 aa8.51□□□□□ -1.05
LIG3-203ENST00000585370 MXRA5Q9NR99 2828 aa8.5□□□□□ -1.05
LIG3-203ENST00000585370 SAA2-SAA4A0A096LPE2 208 aa8.5□□□□□ -1.05
LIG3-203ENST00000585370 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
LIG3-203ENST00000585370 MEX3AA1L020 520 aaKnown RBP8.5□□□□□ -1.05
LIG3-203ENST00000585370 J3QR06 171 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms