RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC25A17O43808 307 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 CA2P00918 260 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 OR8U8P0C7N1 319 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 LINC00205P59089 165 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 KRTAP10-11P60412 298 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 NDPQ00604 133 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 RUNX1Q01196 453 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 DCTN2Q13561 401 aaKnown RBP9.65□□□□□ -0.86
SS18-225ENST00000585121 AKIRIN2Q53H80 203 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 ACTBL2Q562R1 376 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 CROCCP3Q8IVE0 287 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 H1FOOQ8IZA3 346 aaPredicted RBP9.65□□□□□ -0.86
SS18-225ENST00000585121 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 ELF5Q9UKW6 265 aaPredicted RBP9.65□□□□□ -0.86
SS18-225ENST00000585121 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
SS18-225ENST00000585121 TMEM235A6NFC5 223 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 TMEM127O75204 238 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 SLC22A5O76082 557 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 CLEC2LP0C7M8 214 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 LUMP51884 338 aaPredicted RBP9.64□□□□□ -0.87
SS18-225ENST00000585121 GNB1P62873 340 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 DGCR2P98153 550 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 ZNF616Q08AN1 781 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 FXYD3Q14802 87 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 ZNF260Q3ZCT1 412 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 CNIH2Q6PI25 160 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 BVESQ8NE79 360 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 MCFD2Q8NI22 146 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 ARPC1AQ92747 370 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 HARBI1Q96MB7 349 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 OR5B12Q96R08 314 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 GNB4Q9HAV0 340 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 DIABLOQ9NR28 239 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 FBXO7Q9Y3I1 522 aa9.64□□□□□ -0.87
SS18-225ENST00000585121 A0A0A6YYH2 397 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 A6NJ64 397 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 SEC14L6B5MCN3 397 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 I3L521 148 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 K7EIL1 84 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 RAMP3O60896 148 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 EGR2P11161 476 aaPredicted RBP9.63□□□□□ -0.87
SS18-225ENST00000585121 KIAA0141Q14154 515 aaPredicted RBP9.63□□□□□ -0.87
SS18-225ENST00000585121 VMA21Q3ZAQ7 101 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 ZNF645Q8N7E2 425 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 LFNGQ8NES3 379 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 GRPEL2Q8TAA5 225 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 AP3S1Q92572 193 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 FAM103A1Q9BTL3 118 aaKnown RBP9.63□□□□□ -0.87
SS18-225ENST00000585121 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 PRELID3BQ9Y3B1 194 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 OR2W1Q9Y3N9 320 aa9.63□□□□□ -0.87
SS18-225ENST00000585121 TRAV18A0A075B6X5 111 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 J3QRK9 145 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
SS18-225ENST00000585121 ARPC4P59998 168 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 FHL3Q13643 280 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 C19orf54Q5BKX5 351 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 OR6Q1Q8NGQ2 317 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 S100ZQ8WXG8 99 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 TMEM68Q96MH6 324 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 ZNF355PQ9NSJ1 428 aa9.62□□□□□ -0.87
SS18-225ENST00000585121 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 LINC01619G3V211 115 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 CRYZL1O95825 349 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 HLA-DQB1P01920 261 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 NFYAP23511 347 aaPredicted RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 S100A5P33763 92 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 INSL3P51460 131 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 TPPP2P59282 170 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 OR5H6Q8NGV6 325 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 ACOT12Q8WYK0 555 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 ANXA10Q9UJ72 324 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 SPATA2Q9UM82 520 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 MRPS7Q9Y2R9 242 aaKnown RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 H3BUA1 57 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 ARPC1BO15143 372 aaKnown RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 SOX15O60248 233 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 CREBL2O60519 120 aaPredicted RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 TUSC2O75896 110 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 IGLV2-23P01705 113 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 CBX5P45973 191 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 TEX45Q8NA69 505 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 OSR1Q8TAX0 266 aaPredicted RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 S100A16Q96FQ6 103 aaKnown RBP9.61□□□□□ -0.87
SS18-225ENST00000585121 C5orf30Q96GV9 206 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 PHB2Q99623 299 aa9.61□□□□□ -0.87
SS18-225ENST00000585121 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms