RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MRPS7Q9Y2R9 242 aaKnown RBP12.73□□□□□ -0.37
ERBB2-222ENST00000584908 FBXO7Q9Y3I1 522 aa12.73□□□□□ -0.37
ERBB2-222ENST00000584908 A0A1W2PRX2 142 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 H3BMQ9 156 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 SLC25A17O43808 307 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 FCER2P06734 321 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 EGR2P11161 476 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-222ENST00000584908 RFX2P48378 723 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 RPL30P62888 115 aaKnown RBP12.72□□□□□ -0.37
ERBB2-222ENST00000584908 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-222ENST00000584908 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 PPP1R27Q86WC6 154 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 SNX29P2Q8IUI4 249 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 PARP11Q9NR21 331 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 TPSG1Q9NRR2 321 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 PRELID3BQ9Y3B1 194 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 NUBP2Q9Y5Y2 271 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 CEPT1Q9Y6K0 416 aa12.72□□□□□ -0.37
ERBB2-222ENST00000584908 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 G3V318 75 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 SHOXO15266 292 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 CRYZL1O95825 349 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 CA2P00918 260 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 RCVRNP35243 200 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 CDX1P47902 265 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-222ENST00000584908 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 UBE2KP61086 200 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 SSBP2P81877 361 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-222ENST00000584908 MRGPRG-AS1Q2M3A8 158 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 MFSD4AQ8N468 514 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 TCTEX1D1Q8N7M0 179 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 TEX45Q8NA69 505 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 SECTM1Q8WVN6 248 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.37
ERBB2-222ENST00000584908 CTDSP2O14595 271 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
ERBB2-222ENST00000584908 RPLP1P05386 114 aaKnown RBP12.7□□□□□ -0.38
ERBB2-222ENST00000584908 PF4V1P10720 104 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 HRH1P35367 487 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 AKIRIN2Q53H80 203 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 KHDC1LQ5JSQ8 128 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 OR5H2Q8NGV7 314 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 SLIRPQ9GZT3 109 aaKnown RBP12.7□□□□□ -0.38
ERBB2-222ENST00000584908 SLC5A7Q9GZV3 580 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 WSB1Q9Y6I7 421 aa12.7□□□□□ -0.38
ERBB2-222ENST00000584908 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
ERBB2-222ENST00000584908 FCGR3BO75015 233 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 PMP2P02689 132 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 TMEM267Q0VDI3 215 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-222ENST00000584908 KIAA0141Q14154 515 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-222ENST00000584908 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 ZNF818PQ6ZRF7 136 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 ZNF695Q8IW36 515 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 LAX1Q8IWV1 398 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 OR4S2Q8NH73 311 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 BORCS5Q969J3 196 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 CLCC1Q96S66 551 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 ABHD1Q96SE0 405 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 ZNF2Q9BSG1 426 aaPredicted RBP12.69□□□□□ -0.38
ERBB2-222ENST00000584908 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
ERBB2-222ENST00000584908 TAS2R8Q9NYW2 309 aa12.69□□□□□ -0.38
ERBB2-222ENST00000584908 RGS5O15539 181 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.38
ERBB2-222ENST00000584908 SOX15O60248 233 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 GNRHRP30968 328 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 KIR2DS2P43631 304 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 FXYD4P59646 89 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 HERV-K104P61576 105 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 PJVKQ0ZLH3 352 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 FXYD3Q14802 87 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 VAX1Q5SQQ9 334 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 C18orf65Q6ZTR6 163 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 KLHL30-AS1Q8NEE0 82 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
ERBB2-222ENST00000584908 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-222ENST00000584908 MTFP1Q9UDX5 166 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
ERBB2-222ENST00000584908 FOXA2Q9Y261 457 aaPredicted RBP12.68□□□□□ -0.38
ERBB2-222ENST00000584908 PRSS8Q16651 343 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 ECSCRQ19T08 205 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 ACTBL2Q562R1 376 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 PYHIN1Q6K0P9 492 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 C8orf86Q6ZUL3 223 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
ERBB2-222ENST00000584908 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms