RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SMAGPQ0VAQ4 97 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 PLPPR5Q32ZL2 321 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 IQCF2Q8IXL9 164 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 TMEM251Q8N6I4 163 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 ZNF563Q8TA94 476 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 ASB13Q8WXK3 278 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 FGF13Q92913 245 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 SMIM19Q96E16 107 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 LLPHQ9BRT6 129 aaKnown RBP1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 TIMM21Q9BVV7 248 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 TIPINQ9BVW5 301 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 SLC2A9Q9NRM0 540 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 IMP3Q9NV31 184 aaKnown RBP1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 PLEKHJ1Q9NW61 149 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 RPL26L1Q9UNX3 145 aaKnown RBP1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 DOCK10Q96BY6 2186 aa1.28□□□□□ -2.2
PPP4R1-227ENST00000583988 GRIN2BQ13224 1484 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 TRAV41A0A0B4J266 112 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 A0A1W2PQD3 144 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 C5orf49A4QMS7 147 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 OR6C6A6NF89 314 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 BHLHE40O14503 412 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 KRT75O95678 551 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 KRT7P08729 469 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 UGT2B7P16662 529 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 DDTP30046 118 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 CDC34P49427 236 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 RPL14P50914 215 aaKnown RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 IDH3GP51553 393 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 FKBP1AP62942 108 aaKnown RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 HPCAP84074 193 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 ERHP84090 104 aaKnown RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 GNA12Q03113 381 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 LGALS9BQ3B8N2 356 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC36A2Q495M3 483 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 OGFRL1Q5TC84 451 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 TNFAIP8L2Q6P589 184 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC35E3Q7Z769 313 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 BAP18Q8IXM2 172 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 LRRC34Q8IZ02 419 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 Q8N402 240 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC37A2Q8TED4 501 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 DDI1Q8WTU0 396 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 ZNF625Q96I27 306 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 KCTD7Q96MP8 289 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 HES4Q9HCC6 221 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 FGFR1OP2Q9NVK5 253 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 HHLA3Q9XRX5 114 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 HDGFL3Q9Y3E1 203 aa1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 PCYT1BQ9Y5K3 369 aaPredicted RBP1.27□□□□□ -2.21
PPP4R1-227ENST00000583988 SIPA1L1O43166 1804 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 A0A087WUU8 490 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 IGKV2-29A2NJV5 120 aaPredicted RBP1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 M0R381 172 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 AZIN1O14977 448 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 PFDN6O15212 129 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC16A4O15374 487 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 BIRC5O15392 142 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 ADAP1O75689 374 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 DEXIO95424 95 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 IL6P05231 212 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 IFNGR2P38484 337 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 GABRA2P47869 451 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 RAP1GDS1P52306 607 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 EMP1P54849 157 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 EMP2P54851 167 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 CTBP2P56545 445 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 CLDN12P56749 244 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 TMEM33P57088 247 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 MAGOHP61326 146 aaKnown RBP1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 TBPL1P62380 186 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 TMEM31Q5JXX7 168 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 Q6ZRN7 208 aaPredicted RBP1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 SLC51BQ86UW2 128 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 JOSD2Q8TAC2 188 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 RPS4Y2Q8TD47 263 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 ARL5BQ96KC2 179 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 NSRP1Q9H0G5 558 aaKnown RBP1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 DOK5Q9P104 306 aa1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 NOSIPQ9Y314 301 aaKnown RBP1.26□□□□□ -2.21
PPP4R1-227ENST00000583988 MEIKINA0A087WXM9 373 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 TINCRA0A1B0GVN0 87 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 SMIM23A6NLE4 172 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 F5H768 121 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 F8W036 122 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 PEBP1P30086 187 aaKnown RBP1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 HLA-DRB3P79483 266 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 GNA13Q14344 377 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 CST9Q5W186 159 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 OR10K2Q6IF99 312 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 C1orf174Q8IYL3 243 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 MNS1Q8NEH6 495 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 PIGXQ8TBF5 258 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 SPACA4Q8TDM5 124 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 RNF133Q8WVZ7 376 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 TMA16Q96EY4 203 aaKnown RBP1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 MS4A6AQ9H2W1 248 aa1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 POLR3HQ9Y535 204 aaPredicted RBP1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 HELZ2Q9BYK8 2649 aaKnown RBP1.25□□□□□ -2.21
PPP4R1-227ENST00000583988 NUP160Q12769 1436 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms