RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
GGA3-216ENST00000583282 SHOXO15266 292 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 UCP3P55916 312 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 PIGPP57054 158 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 RPL15P61313 204 aaKnown RBP11.16□□□□□ -0.62
GGA3-216ENST00000583282 BLCAPP62952 87 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 LPCAT3Q6P1A2 487 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 Q6ZS46 218 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 TBC1D26Q86UD7 250 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 Q8N9W7 124 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 OR4S2Q8NH73 311 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 LIN7CQ9NUP9 197 aaKnown RBP11.16□□□□□ -0.62
GGA3-216ENST00000583282 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
GGA3-216ENST00000583282 NF1P21359 2839 aa11.16□□□□□ -0.62
GGA3-216ENST00000583282 SLC25A17O43808 307 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 RAMP3O60896 148 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 PGLYRP1O75594 196 aaPredicted RBP11.15□□□□□ -0.62
GGA3-216ENST00000583282 AMY1AP04745 511 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 HKR1P10072 659 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 RRASP10301 218 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 MDKP21741 143 aaPredicted RBP11.15□□□□□ -0.62
GGA3-216ENST00000583282 ECI1P42126 302 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 KIR2DS2P43631 304 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 CCR6P51684 374 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 SPAG16Q8N0X2 631 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 POC5Q8NA72 575 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.62
GGA3-216ENST00000583282 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 RANBP3Q9H6Z4 567 aaPredicted RBP11.15□□□□□ -0.62
GGA3-216ENST00000583282 COPZ2Q9P299 210 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 METTL1Q9UBP6 276 aaKnown RBP11.15□□□□□ -0.62
GGA3-216ENST00000583282 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
GGA3-216ENST00000583282 M0QZK8 103 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 RRHO14718 337 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 FGF16O43320 207 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 UPK1BO75841 260 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 S1PR2O95136 353 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 NDUFA7O95182 113 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
GGA3-216ENST00000583282 TAGLNQ01995 201 aaKnown RBP11.14□□□□□ -0.63
GGA3-216ENST00000583282 TMEM177Q53S58 311 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 SSX9Q7RTT3 188 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 TMED4Q7Z7H5 227 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 FAM71E2Q8N5Q1 922 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 CCDC71LQ8N9Z2 235 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 OR8H1Q8NGG4 311 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 ZFAND1Q8TCF1 268 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 CLCC1Q96S66 551 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
GGA3-216ENST00000583282 CENPXA8MT69 81 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 LYRM1O43325 122 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 NDUFA3O95167 84 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 SPDEFO95238 335 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
GGA3-216ENST00000583282 RPA2P15927 270 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 BTCP35070 178 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 VDAC2P45880 294 aaPredicted RBP11.13□□□□□ -0.63
GGA3-216ENST00000583282 BRWD1-AS2P59051 145 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 RND3P61587 244 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 PSG5Q15238 335 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 SURF2Q15527 256 aaPredicted RBP11.13□□□□□ -0.63
GGA3-216ENST00000583282 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 C11orf88Q6PI97 169 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 ZNF486Q96H40 463 aaPredicted RBP11.13□□□□□ -0.63
GGA3-216ENST00000583282 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
GGA3-216ENST00000583282 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 PLSCR3Q9NRY6 295 aa11.13□□□□□ -0.63
GGA3-216ENST00000583282 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
GGA3-216ENST00000583282 MPPED1O15442 326 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 PLA2G10O15496 165 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 TSPAN9O75954 239 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 VSIG10L2P0DP72 767 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 F2RP25116 425 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 GNB1P62873 340 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
GGA3-216ENST00000583282 VMA21Q3ZAQ7 101 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 SLC35E3Q7Z769 313 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 ADAD2Q8NCV1 583 aaKnown RBP11.12□□□□□ -0.63
GGA3-216ENST00000583282 NPBQ8NG41 125 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 OSR1Q8TAX0 266 aaPredicted RBP11.12□□□□□ -0.63
GGA3-216ENST00000583282 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 MDFIQ99750 246 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
GGA3-216ENST00000583282 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 TBC1D24Q9ULP9 559 aa11.12□□□□□ -0.63
GGA3-216ENST00000583282 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
GGA3-216ENST00000583282 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
GGA3-216ENST00000583282 H0Y980 276 aa11.11□□□□□ -0.63
GGA3-216ENST00000583282 HAX1O00165 279 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms