RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PPP5D1E7EU14 171 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 TMEM50BP56557 158 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 FAM89BQ8N5H3 189 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 OR6M1Q8NGM8 313 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 GFI1Q99684 422 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 ZC4H2Q9NQZ6 224 aa12.14□□□□□ -0.47
SREBF1-221ENST00000583080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
SREBF1-221ENST00000583080 C2orf70A6NJV1 201 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 TRDCB7Z8K6 153 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 MPPED1O15442 326 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 HLA-AP01891 365 aaKnown RBP12.13□□□□□ -0.47
SREBF1-221ENST00000583080 CD37P11049 281 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 PRSS8Q16651 343 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 C10orf55Q5SWW7 151 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
SREBF1-221ENST00000583080 URM1Q9BTM9 101 aaKnown RBP12.13□□□□□ -0.47
SREBF1-221ENST00000583080 PECRQ9BY49 303 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
SREBF1-221ENST00000583080 KMT2AQ03164 3969 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 TRBV9A0A0B4J1U6 114 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 BET1O15155 118 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 GNAO1P09471 354 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 FOLR2P14207 255 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 KIR2DS2P43631 304 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 ATP5G2Q06055 141 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 HSD17B12Q53GQ0 312 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 CEACAM19Q7Z692 300 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 DMRT1Q9Y5R6 373 aa12.12□□□□□ -0.47
SREBF1-221ENST00000583080 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 FABP7O15540 132 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 TUSC2O75896 110 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 CRYZL1O95825 349 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 UCHL1P09936 223 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 UBE2KP61086 200 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
SREBF1-221ENST00000583080 CBX3Q13185 183 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 C10orf67Q8IYJ2 551 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 MS4A15Q8N5U1 240 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 OR4A4PQ8NGN8 299 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 DDB2Q92466 427 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
SREBF1-221ENST00000583080 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-221ENST00000583080 OR2J3O76001 311 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 SERPINB10P48595 397 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 CLDN12P56749 244 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
SREBF1-221ENST00000583080 PLA2G7Q13093 441 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 C15orf32Q32M92 178 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 MAFIPQ8WZ33 124 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 PLGRKTQ9HBL7 147 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 FKBP14Q9NWM8 211 aa12.1□□□□□ -0.47
SREBF1-221ENST00000583080 TRBV6-7A0A0A0MS04 114 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 LINC00473A8K010 186 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 SLC17A2O00624 439 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 OR2C1O95371 312 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 GSTT2BP0CG30 244 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
SREBF1-221ENST00000583080 DHRSXQ8N5I4 330 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 KCTD12Q96CX2 325 aaKnown RBP12.09□□□□□ -0.47
SREBF1-221ENST00000583080 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
SREBF1-221ENST00000583080 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
SREBF1-221ENST00000583080 AK6Q9Y3D8 172 aaKnown RBP12.09□□□□□ -0.47
SREBF1-221ENST00000583080 DNAH10Q8IVF4 4471 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 FCGR3AP08637 254 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 RRASP10301 218 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
SREBF1-221ENST00000583080 RAB11BQ15907 218 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-221ENST00000583080 RPP25LQ8N5L8 163 aaKnown RBP12.08□□□□□ -0.48
SREBF1-221ENST00000583080 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 OR10J5Q8NHC4 309 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 FBLIM1Q8WUP2 373 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 CCDC140Q96MF4 163 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
SREBF1-221ENST00000583080 MLXQ9UH92 298 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms