RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 TGIF1Q15583 401 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 RCC1LQ96I51 464 aaKnown RBP4.94□□□□□ -1.62
RTTN-209ENST00000583043 ZNF430Q9H8G1 570 aaPredicted RBP4.94□□□□□ -1.62
RTTN-209ENST00000583043 TMEM140Q9NV12 185 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 WDR83OSQ9Y284 106 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 ATXN7O15265 892 aaPredicted RBP4.94□□□□□ -1.62
RTTN-209ENST00000583043 CNIH1O95406 144 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 OR4A8P0C604 315 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 PMCHP20382 165 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 GATA4P43694 442 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 Q0VFX4 171 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 ZNF837Q96EG3 531 aaPredicted RBP4.94□□□□□ -1.62
RTTN-209ENST00000583043 URGCP-MRPS24S4R325 110 aa4.94□□□□□ -1.62
RTTN-209ENST00000583043 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 IGKV3-15P01624 115 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 GYPAP02724 150 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 RPL29P47914 159 aaKnown RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 TAS2R60P59551 318 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 ERVFC1-1P60608 527 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 PKIAP61925 76 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 TLE1Q04724 770 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 OR52L2PQ8NGH6 319 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 RFESDQ8TAC1 157 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 HARBI1Q96MB7 349 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 PCGF1Q9BSM1 259 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 AAMDCQ9H7C9 122 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 BARX1Q9HBU1 254 aaPredicted RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 YTHDF2Q9Y5A9 579 aaKnown RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 Q6P435 159 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 SDF2L1Q9HCN8 221 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 DOCK8Q8NF50 2099 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 A0A087WV48 116 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 A0A1B0GW15 77 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 HELTA6NFD8 242 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 ZNF705GA8MUZ8 300 aaPredicted RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 PAGE4O60829 102 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 NXPH3O95157 252 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 ERVK11-1P61568 191 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 C10orf113Q5VZT2 155 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 STUMQ69YW2 141 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 NPCDR1Q9BY65 106 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 DMRT1Q9Y5R6 373 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 C8orf88P0DMB2 117 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 FOXL2P58012 376 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 VASH2Q86V25 355 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 BATF2Q8N1L9 274 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 ZNF488Q96MN9 340 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 LRFN3Q9BTN0 628 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 MS4A7Q9GZW8 240 aaPredicted RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 RPRMQ9NS64 109 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 OR1A1Q9P1Q5 309 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 BMP5P22003 454 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 SSTP61278 116 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 UBE2L3P68036 154 aaKnown RBP4.93□□□□□ -1.62
RTTN-209ENST00000583043 WDR82Q6UXN9 313 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 TMEM144Q7Z5S9 345 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 DEFB108BQ8NET1 73 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 Q8TCH9 128 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 ITLN1Q8WWA0 313 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 KLHDC3Q9BQ90 382 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 SMOC1Q9H4F8 434 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 BET1LQ9NYM9 111 aa4.93□□□□□ -1.62
RTTN-209ENST00000583043 SERTM2A0A1B0GWG4 89 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 F2RL2O00254 374 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 NKX2-8O15522 239 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 C3AR1Q16581 482 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 TMEM183BQ1AE95 376 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 AP1S3Q96PC3 154 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 MDC1Q14676 2089 aaKnown RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 ISLRO14498 428 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 MGST1P10620 155 aaKnown RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 OR10J1P30954 320 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 WNT5AP41221 380 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 PRSS12P56730 875 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 TMPRSS3P57727 454 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 DMRTC1Q5HYR2 192 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 RNFT1Q5M7Z0 435 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 TMPRSS7Q7RTY8 843 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 PLPPR1Q8TBJ4 325 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 CACNA1CQ13936 2221 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 SEC16AO15027 2179 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 IGKV1D-8A0A087WSZ0 117 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 S1PR2O95136 353 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 HIST1H1BP16401 226 aaKnown RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 IGFL2Q6UWQ7 119 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 GUCD1Q96NT3 240 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 SCNM1Q9BWG6 230 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 C15orf61A6NNL5 157 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 OOSP1A8MZH6 123 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 CHEK1O14757 476 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 RPL27AP46776 148 aaKnown RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 RPS20P60866 119 aaKnown RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 FAM78BQ5VT40 261 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 TEX29Q8N6K0 151 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 NEU4Q8WWR8 484 aaPredicted RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 OPN3Q9H1Y3 402 aaPredicted RBP4.92□□□□□ -1.62
RTTN-209ENST00000583043 FUT9Q9Y231 359 aa4.92□□□□□ -1.62
RTTN-209ENST00000583043 FOXA2Q9Y261 457 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms