RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 OR8U9P0C7N5 309 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 ELK1P19419 428 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 TAS2R20P59543 309 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 MORN2Q502X0 79 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 C19orf54Q5BKX5 351 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 TMEM69Q5SWH9 247 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 LIN54Q6MZP7 749 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 C15orf40Q8WUR7 153 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 YPEL2Q96QA6 119 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 NABP2Q9BQ15 211 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 CABLES2Q9BTV7 478 aa10.45□□□□□ -0.74
SS18-222ENST00000582792 A0A1W2PN81 502 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 A8MZ25 164 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 SULT1C2O00338 296 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 NDUFA3O95167 84 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 CTXN2P0C2S0 81 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 CHRNA7P36544 502 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
SS18-222ENST00000582792 NDPQ00604 133 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 ODF3L1Q8IXM7 274 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 Q8N1Y9 231 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 NPBQ8NG41 125 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 SETD6Q8TBK2 473 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 OR4C12Q96R67 309 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 ABHD14AQ9BUJ0 271 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
SS18-222ENST00000582792 MIXL1Q9H2W2 232 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 SCPEP1Q9HB40 452 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 OR2S2Q9NQN1 319 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 C19orf73Q9NVV2 129 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
SS18-222ENST00000582792 FBXO7Q9Y3I1 522 aa10.44□□□□□ -0.74
SS18-222ENST00000582792 A6NHS1 94 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 FAM25AB3EWG3 89 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 FAM25CB3EWG5 89 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 FAM25GB3EWG6 89 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 CTDSP2O14595 271 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 FABP7O15540 132 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 SSX5O60225 188 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 HLA-DQB1P01920 261 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 GNMTQ14749 295 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 MCFD2Q8NI22 146 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 NUDCD2Q8WVJ2 157 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 BATF3Q9NR55 127 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 KIAA1456Q9P272 454 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 ELF5Q9UKW6 265 aaPredicted RBP10.43□□□□□ -0.74
SS18-222ENST00000582792 ANAPC10Q9UM13 185 aa10.43□□□□□ -0.74
SS18-222ENST00000582792 HSPA12AO43301 675 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 SCTP09683 121 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 ZBTB25P24278 435 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 PRSS3P35030 304 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 ZNF660Q6AZW8 331 aaPredicted RBP10.42□□□□□ -0.74
SS18-222ENST00000582792 CNIH2Q6PI25 160 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 ZNF833PQ6ZTB9 187 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 SGPP2Q8IWX5 399 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 TCTEX1D1Q8N7M0 179 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 OR52L2PQ8NGH6 319 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 CASTOR1Q8WTX7 329 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 EDARADDQ8WWZ3 215 aa10.42□□□□□ -0.74
SS18-222ENST00000582792 FLYWCH2Q96CP2 140 aaKnown RBP10.42□□□□□ -0.74
SS18-222ENST00000582792 TRBV6-7A0A0A0MS04 114 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 ARPC1BO15143 372 aaKnown RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 RGS5O15539 181 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 IGLV1-51P01701 117 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 HSPB1P04792 205 aaKnown RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 NAT1P18440 290 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 PPP1CCP36873 323 aaKnown RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 CX3CL1P78423 397 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 MRPS10P82664 201 aaKnown RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 PYHIN1Q6K0P9 492 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 GPX8Q8TED1 209 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 IL1F10Q8WWZ1 152 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 DCUN1D5Q9BTE7 237 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 ST6GALNAC5Q9BVH7 336 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 ELOVL1Q9BW60 279 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 C6orf62Q9GZU0 229 aaPredicted RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 EXTL2Q9UBQ6 330 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 ZNF230Q9UIE0 474 aaPredicted RBP10.41□□□□□ -0.74
SS18-222ENST00000582792 NUBP2Q9Y5Y2 271 aa10.41□□□□□ -0.74
SS18-222ENST00000582792 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.74
SS18-222ENST00000582792 SAA2-SAA4A0A096LPE2 208 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 CTDSPLO15194 276 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 SAA2P0DJI9 122 aaPredicted RBP10.4□□□□□ -0.74
SS18-222ENST00000582792 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
SS18-222ENST00000582792 OR3A3P47888 321 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 TMEM267Q0VDI3 215 aaPredicted RBP10.4□□□□□ -0.74
SS18-222ENST00000582792 FAM71F2Q6NXP2 309 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 HAPLN4Q86UW8 402 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 LAX1Q8IWV1 398 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 BEST4Q8NFU0 473 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 OR2AK2Q8NG84 335 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms