RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GLDNQ6ZMI3 551 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 SPAG16Q8N0X2 631 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 OSR1Q8TAX0 266 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 DDB2Q92466 427 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 ALX4Q9H161 411 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 VSIG4Q9Y279 399 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 MTORP42345 2549 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 IGHV3-72A0A0B4J1Y9 119 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 LINC00473A8K010 186 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 H0Y980 276 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 SHOXO15266 292 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 HPRT1P00492 218 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 H2AFB2P0C5Z0 115 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 RAG2P55895 527 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 RPL30P62888 115 aaKnown RBP11.47□□□□□ -0.57
SKA2-205ENST00000580541 SRPXP78539 464 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 SLC25A42Q86VD7 318 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
SKA2-205ENST00000580541 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 NAA60Q9H7X0 242 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 PLEKHA2Q9HB19 425 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 VPREB3Q9UKI3 123 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
SKA2-205ENST00000580541 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
SKA2-205ENST00000580541 OR2F2O95006 317 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 CRYZL1O95825 349 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 DHFRP00374 187 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 PAX6P26367 422 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 RAB25P57735 213 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 HILS1P60008 231 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 RPL15P61313 204 aaKnown RBP11.46□□□□□ -0.57
SKA2-205ENST00000580541 ERVK-16P61578 105 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 HNF4GQ14541 408 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 TMEM177Q53S58 311 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 VSTM2AQ8TAG5 236 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
SKA2-205ENST00000580541 NUDT15Q9NV35 164 aa11.46□□□□□ -0.57
SKA2-205ENST00000580541 TRAV6A0A075B6T7 132 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 A6NDX4 124 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
SKA2-205ENST00000580541 TRIM77I1YAP6 450 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 PEX14O75381 377 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 SPDEFO95238 335 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 CRYBA1P05813 215 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 NQO2P16083 231 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 CD24P25063 80 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 VMA21Q3ZAQ7 101 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 C4orf46Q504U0 113 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 ADAD2Q8NCV1 583 aaKnown RBP11.45□□□□□ -0.58
SKA2-205ENST00000580541 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 ZFAND2BQ8WV99 257 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 HARBI1Q96MB7 349 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 GPN1Q9HCN4 374 aaPredicted RBP11.45□□□□□ -0.58
SKA2-205ENST00000580541 COMMD9Q9P000 198 aa11.45□□□□□ -0.58
SKA2-205ENST00000580541 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
SKA2-205ENST00000580541 FGF16O43320 207 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
SKA2-205ENST00000580541 PRAF2O60831 178 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 OR4E1P0C645 316 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 VAMP1P23763 118 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 LPAR6P43657 344 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 LINC00205P59089 165 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 MMDQ15546 238 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 LY6EQ16553 131 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 ZNF695Q8IW36 515 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 GPHA2Q96T91 129 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 RASL11BQ9BPW5 248 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 SLC25A33Q9BSK2 321 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 TMEM222Q9H0R3 208 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 FLVCR2Q9UPI3 526 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
SKA2-205ENST00000580541 NSD1Q96L73 2696 aaPredicted RBP11.44□□□□□ -0.58
SKA2-205ENST00000580541 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 NBR2O15453 112 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 SFT2D2O95562 160 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 UCP1P25874 307 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 MECP2P51608 486 aaKnown RBP11.43□□□□□ -0.58
SKA2-205ENST00000580541 PLGLAQ15195 96 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 CADM3Q8N126 398 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 LGI3Q8N145 548 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 TEX45Q8NA69 505 aa11.43□□□□□ -0.58
SKA2-205ENST00000580541 DMBX1Q8NFW5 382 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms