RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 GNG11P61952 73 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 FABP5Q01469 135 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 SRSF9Q13242 221 aaKnown RBP eCLIP5.21□□□□□ -1.58
COPS3-216ENST00000579716 HES1Q14469 280 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 HMGN3Q15651 99 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 FAM153CQ494X1 144 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 TMEM244Q5VVB8 128 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 Q5XG85 94 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 CNIH2Q6PI25 160 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 LCN15Q6UWW0 184 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 Q6ZRU5 148 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 PIP4P1Q86T03 277 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 FTMTQ8N4E7 242 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 ZFP62Q8NB50 900 aaPredicted RBP5.21□□□□□ -1.58
COPS3-216ENST00000579716 OR5D14Q8NGL3 314 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 OR4C16Q8NGL9 310 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 OR2T6Q8NHC8 308 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 SLC25A46Q96AG3 418 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 OVOL2Q9BRP0 275 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 THTPAQ9BU02 230 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 COMMD5Q9GZQ3 224 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 GNB4Q9HAV0 340 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 PDFQ9HBH1 243 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 ASF1BQ9NVP2 202 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 RIMS3Q9UJD0 308 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 MRPS16Q9Y3D3 137 aaKnown RBP5.21□□□□□ -1.58
COPS3-216ENST00000579716 DENND4AQ7Z401 1863 aa5.21□□□□□ -1.58
COPS3-216ENST00000579716 PREX2Q70Z35 1606 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 SLIT3O75094 1523 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 TRAV4A0A0B4J268 109 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 UNC119BA6NIH7 251 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 VWC2LB2RUY7 222 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 DEDDO75618 318 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 EPPINO95925 133 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 LINC00032P0C843 101 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 EGR2P11161 476 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 DRD3P35462 400 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 ZNF93P35789 620 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 FOLR3P41439 243 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 RPS27AP62979 156 aaKnown RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 CRADDP78560 199 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 DAZ2Q13117 558 aaKnown RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 KLRD1Q13241 179 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 VMA21Q3ZAQ7 101 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 FKBP1CQ5VVH2 108 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 ALKAL2Q6UX46 152 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 DAZ4Q86SG3 579 aaKnown RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 ZNF441Q8N8Z8 693 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 OR2T27Q8NH04 317 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 OR5AK2Q8NH90 309 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 SLC25A21Q9BQT8 299 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 RTL8AQ9BWD3 113 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 DAZ1Q9NQZ3 744 aaKnown RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 DAZ3Q9NR90 486 aaKnown RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 HEBP1Q9NRV9 189 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 FKBP11Q9NYL4 201 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 MDFICQ9P1T7 246 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 ZNF629Q9UEG4 869 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 ZNF443Q9Y2A4 671 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 ZNF256Q9Y2P7 627 aaPredicted RBP5.2□□□□□ -1.58
COPS3-216ENST00000579716 DCCP43146 1447 aa5.2□□□□□ -1.58
COPS3-216ENST00000579716 ABCA9Q8IUA7 1624 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 CUL7Q14999 1698 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 H0YIZ8 118 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 ANGPTL7O43827 346 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 LMX1BO60663 402 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 PRSS3P35030 304 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 RND2P52198 227 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 NDUFV3P56181 108 aaKnown RBP5.19□□□□□ -1.58
COPS3-216ENST00000579716 CATR1Q13166 79 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 EIF3IQ13347 325 aaKnown RBP5.19□□□□□ -1.58
COPS3-216ENST00000579716 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 SLC25A30Q5SVS4 291 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 Q6ZN92 141 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 SSX8Q7RTT4 187 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 LRRTM1Q86UE6 522 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 RNF175Q8N4F7 328 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 KCNRGQ8N5I3 272 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 RTN4IP1Q8WWV3 396 aaPredicted RBP5.19□□□□□ -1.58
COPS3-216ENST00000579716 FAM19A4Q96LR4 140 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 SOSTQ9BQB4 213 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 SNRNP25Q9BV90 132 aaKnown RBP5.19□□□□□ -1.58
COPS3-216ENST00000579716 LIME1Q9H400 295 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 DUSP21Q9H596 190 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 TMEM100Q9NV29 134 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 MPC1Q9Y5U8 109 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 PXMP4Q9Y6I8 212 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 USP6P35125 1406 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 PTPRKQ15262 1439 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 HECW2Q9P2P5 1572 aa5.19□□□□□ -1.58
COPS3-216ENST00000579716 DUOX2Q9NRD8 1548 aa5.18□□□□□ -1.58
COPS3-216ENST00000579716 NRKQ7Z2Y5 1582 aa5.18□□□□□ -1.58
COPS3-216ENST00000579716 TNS2Q63HR2 1409 aa5.18□□□□□ -1.58
COPS3-216ENST00000579716 A0A0D9SG52 128 aa5.18□□□□□ -1.58
COPS3-216ENST00000579716 LOC100131303A0A0U1RQF7 123 aa5.18□□□□□ -1.58
COPS3-216ENST00000579716 TCRBV3S1A0A5B6 114 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms