RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 BARX1Q9HBU1 254 aaPredicted RBP9.16□□□□□ -0.94
SKA2-204ENST00000578519 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 C19orf12Q9NSK7 152 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 SLC35D1Q9NTN3 355 aa9.16□□□□□ -0.94
SKA2-204ENST00000578519 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 IGHV2-70P01814 119 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 MBP02144 154 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 LOXP28300 417 aaPredicted RBP9.15□□□□□ -0.94
SKA2-204ENST00000578519 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.94
SKA2-204ENST00000578519 RAB13P51153 203 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 GNB2P62879 340 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 SLC38A11Q08AI6 406 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 ZNF616Q08AN1 781 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
SKA2-204ENST00000578519 BTNL8Q6UX41 500 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 CLEC9AQ6UXN8 241 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 TMEM14EPQ6UXP3 125 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 PUSL1Q8N0Z8 303 aaKnown RBP9.15□□□□□ -0.94
SKA2-204ENST00000578519 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 ZNF596Q8TC21 504 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 DDB2Q92466 427 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 PCGF1Q9BSM1 259 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 TMEM147Q9BVK8 224 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 GGACTQ9BVM4 153 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 DCAF16Q9NXF7 216 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 FBXO7Q9Y3I1 522 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 AMMECR1Q9Y4X0 333 aaPredicted RBP9.15□□□□□ -0.94
SKA2-204ENST00000578519 TIMM9Q9Y5J7 89 aa9.15□□□□□ -0.94
SKA2-204ENST00000578519 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.95
SKA2-204ENST00000578519 A0A087X0M5 115 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 A0A1B0GX30 115 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 MEX3AA1L020 520 aaKnown RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 J3QR06 171 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 TMEM50AO95807 157 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 CRYZL1O95825 349 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 METTL15P1P0C7V9 234 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 COL8A2P25067 703 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 TMEM267Q0VDI3 215 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 ZNF273Q14593 569 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 LRRC75BQ2VPJ9 315 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 TMEM182Q6ZP80 229 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 TCF23Q7RTU1 214 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 TGIF2LYQ8IUE0 185 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 MRPL41Q8IXM3 137 aaKnown RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 OR4A5Q8NH83 315 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 FAM213BQ8TBF2 198 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 ITLN2Q8WWU7 325 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 BSCL2Q96G97 398 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 RHOVQ96L33 236 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 CHODLQ9H9P2 273 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 HEYLQ9NQ87 328 aaPredicted RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 TMEM140Q9NV12 185 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 DYSFO75923 2080 aa9.14□□□□□ -0.95
SKA2-204ENST00000578519 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
SKA2-204ENST00000578519 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 B8ZZF3 427 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 H3BP45 60 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 SLC31A2O15432 143 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 PPIHO43447 177 aaKnown RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 PROP1O75360 226 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 IFNA10P01566 189 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 LIPFP07098 398 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 M6PRP20645 277 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 GNLYP22749 145 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 PLA2G5P39877 138 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 HOXA1P49639 335 aaPredicted RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 BRWD1-AS2P59051 145 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 ERVFRD-1P60508 538 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 HSPE1P61604 102 aaKnown RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 FAM53AQ6NSI3 398 aaPredicted RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 SSX9Q7RTT3 188 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 THNSL2Q86YJ6 484 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 PDPNQ86YL7 162 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 ABHD12Q8N2K0 398 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 ZNF525Q8N782 197 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 BPIFCQ8NFQ6 507 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 OR13D1Q8NGV5 346 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 LEAP2Q969E1 77 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 LHX4Q969G2 390 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 FLYWCH2Q96CP2 140 aaKnown RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 RBMXL1Q96E39 390 aaKnown RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 TMEM133Q9H2Q1 129 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 KCNIP2Q9NS61 270 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 UQCC1Q9NVA1 299 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
SKA2-204ENST00000578519 ZNF257Q9Y2Q1 563 aa9.13□□□□□ -0.95
SKA2-204ENST00000578519 PPIAL4CA0A0B4J2A2 164 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms